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CHMP5
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  • CHMP5
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:49.2 nTPM
HPA:49.2 nTPM
GTEx:71.5 nTPM
FANTOM5:170.4 Scaled Tags Per Million
Pig:78.9 nTPM
Mouse:122.0 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042883Antibody HPA056437Antibody CAB033874
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumLow







BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 49.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 48.7
2481 Female, age 94, left hemisphere 51.1
2846 Female, age 79, unknown 50.9
2288 Male, age 75, left hemisphere 49.7
1857 Female, age 85, left hemisphere 48.8
1854 Male, age 80, left hemisphere 48.5
2290 Female, age 72, unknown 48.1
1781 Male, age 74, unknown 47.9
2289 Male, age 61, right hemisphere 44.9
Claustrum
nTPM: 46.5
1956 Male, age 74, unknown 49.1
2196 Female, age 79, unknown 48.5
2392 Female, age 94, both hemispheres 48.4
2198 Male, age 80, both hemispheres 47.5
2491 Male, age 75, both hemispheres 46.3
2292 Female, age 85, both hemispheres 45.9
2568 Male, age 61, both hemispheres 45.5
2284 Female, age 91, both hemispheres 44.4
2645 Female, age 72, unknown 43.2
Globus pallidus, externus
nTPM: 47.5
2772 Female, age 79, unknown 51.4
1996 Male, age 80, right hemisphere 50.5
2395 Male, age 75, both hemispheres 49.3
2646 Male, age 61, right hemisphere 43.4
2567 Female, age 72, unknown 43.0
Globus pallidus, internus
nTPM: 49.1
2287 Male, age 75, right hemisphere 53.4
2778 Female, age 91, both hemispheres 52.1
2483 Female, age 94, right hemisphere 48.7
2037 Male, age 80, right hemisphere 48.4
1818 Male, age 74, unknown 48.1
2111 Female, age 85, right hemisphere 47.2
2566 Female, age 72, unknown 45.5
Nucleus accumbens
nTPM: 49.2
2391 Female, age 94, left hemisphere 52.2
2286 Male, age 75, left hemisphere 51.7
1806 Female, age 85, left hemisphere 49.2
1856 Female, age 91, right hemisphere 49.2
2698 Female, age 72, unknown 49.2
1783 Male, age 74, unknown 48.4
2824 Male, age 61, right hemisphere 47.9
2732 Male, age 80, right hemisphere 45.7
Nucleus basalis of Meynert
nTPM: 47.0
2821 Male, age 75, both hemispheres 49.7
2393 Male, age 80, right hemisphere 47.3
2484 Female, age 94, left hemisphere 47.3
2569 Male, age 61, both hemispheres 43.5
Nucleus of the diagonal band
nTPM: 48.5
1812 Female, age 91, both hemispheres 51.2
2775 Male, age 80, right hemisphere 50.1
2195 Female, age 85, both hemispheres 48.0
2029 Male, age 61, right hemisphere 47.2
1979 Male, age 74, unknown 45.7
Olfactory tubercle
nTPM: 47.3
1846 Male, age 80, right hemisphere 49.3
1998 Female, age 91, both hemispheres 47.9
2856 Male, age 75, right hemisphere 46.9
2487 Female, age 94, left hemisphere 45.0
Putamen
nTPM: 47.5
2482 Female, age 94, left hemisphere 50.2
1937 Female, age 91, right hemisphere 49.8
1838 Male, age 80, right hemisphere 48.9
2466 Female, age 79, unknown 48.3
1829 Male, age 74, unknown 47.8
2647 Male, age 75, left hemisphere 44.4
2489 Female, age 72, unknown 43.0
Septal nuclei
nTPM: 47.7
2031 Female, age 72, unknown 51.9
2629 Female, age 94, right hemisphere 49.0
1960 Male, age 74, unknown 48.7
2009 Female, age 91, both hemispheres 47.9
2059 Female, age 85, both hemispheres 45.5
2394 Male, age 61, left hemisphere 45.5
2199 Male, age 80, right hemisphere 45.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 71.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 68.3
Samples: 246

Max nTPM: 142.4
Min nTPM: 39.9
Std nTPM: 13.5
Median nTPM: 65.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 142.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 127.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 123.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 117.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 116.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 116.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 102.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 100.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 97.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 93.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 92.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 91.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 90.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 90.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 89.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 89.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 87.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 85.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 85.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 84.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 84.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 84.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 84.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 83.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 83.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 82.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 82.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 81.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 80.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 79.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 79.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 79.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 79.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 79.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 78.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 78.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 78.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 77.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 77.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 76.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 76.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 76.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 75.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 75.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 75.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 75.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 75.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 74.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 74.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 74.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 74.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 74.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 74.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 74.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 74.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 74.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 74.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 74.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 74.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 73.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 73.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 73.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 72.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 72.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 72.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 71.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 70.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 70.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 70.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 70.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 70.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 70.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 70.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 70.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 70.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 69.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 69.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 69.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 69.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 69.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 69.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 68.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 68.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 68.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 68.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 68.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 68.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 68.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 68.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 68.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 67.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 67.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 67.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 67.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 67.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 67.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 66.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 66.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 66.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 66.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 66.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 65.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 65.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 65.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 65.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 65.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 65.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 65.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 64.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 64.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 64.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 64.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 64.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 64.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 64.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 64.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 64.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 64.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 64.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 64.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 64.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 64.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 63.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 63.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 63.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 63.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 63.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 63.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 63.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 63.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 62.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 62.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 62.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 62.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 62.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 62.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 62.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 62.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 62.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 62.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 62.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 62.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 62.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 62.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 62.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 62.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 61.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 61.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 61.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 61.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 61.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 60.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 60.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 60.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 60.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 60.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 60.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 60.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 59.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 59.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 59.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 59.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 59.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 59.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 59.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 58.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 58.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 58.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 58.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 58.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 58.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 58.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 57.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 57.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 57.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 57.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 56.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 56.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 55.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 55.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 55.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 55.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 54.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 54.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 54.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 54.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 54.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 53.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 53.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 53.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 53.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 53.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 53.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 51.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 49.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 49.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 47.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 47.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 46.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 45.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 39.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 71.5
Samples: 246

Max nTPM: 141.7
Min nTPM: 41.8
Std nTPM: 14.7
Median nTPM: 70.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 141.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 130.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 119.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 110.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 107.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 104.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 101.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 101.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 99.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 99.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 98.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 97.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 95.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 95.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 95.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 94.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 93.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 93.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 93.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 92.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 92.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 91.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 91.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 91.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 90.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 89.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 89.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 89.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 88.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 88.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 88.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 88.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 86.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 86.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 86.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 85.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 85.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 85.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 85.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 85.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 84.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 84.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 83.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 83.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 83.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 83.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 83.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 83.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 83.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 81.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 81.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 81.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 81.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 81.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 80.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 80.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 80.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 79.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 79.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 79.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 79.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 79.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 78.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 78.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 78.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 77.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 77.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 77.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 77.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 77.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 77.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 76.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 76.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 76.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 76.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 76.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 76.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 76.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 76.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 76.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 75.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 75.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 75.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 75.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 75.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 75.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 75.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 74.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 74.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 74.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 74.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 74.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 74.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 73.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 73.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 73.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 73.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 73.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 73.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 73.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 72.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 72.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 72.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 72.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 72.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 72.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 72.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 71.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 71.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 71.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 71.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 71.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 71.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 71.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 71.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 70.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 70.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 70.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 70.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 70.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 70.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 69.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 69.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 69.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 69.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 69.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 69.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 69.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 68.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 68.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 68.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 68.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 68.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 68.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 68.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 68.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 68.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 67.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 67.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 67.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 66.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 66.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 66.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 66.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 66.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 66.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 66.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 66.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 65.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 65.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 65.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 65.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 65.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 64.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 64.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 64.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 64.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 64.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 64.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 63.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 63.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 63.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 63.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 63.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 63.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 63.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 62.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 62.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 62.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 62.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 62.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 62.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 62.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 62.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 61.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 61.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 61.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 61.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 60.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 60.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 60.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 60.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 60.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 59.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 59.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 59.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 59.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 59.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 59.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 59.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 58.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 58.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 58.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 58.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 58.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 58.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 57.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 57.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 57.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 57.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 57.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 56.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 56.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 56.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 56.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 55.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 55.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 54.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 54.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 53.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 53.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 52.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 52.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 52.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 52.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 52.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 51.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 51.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 51.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 50.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 50.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 49.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 48.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 48.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 48.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 48.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 47.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 46.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 45.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 45.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 41.8
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Brain - Putamen (basal ganglia)
Average nTPM: 70.2
Samples: 205

Max nTPM: 130.1
Min nTPM: 43.7
Std nTPM: 12.7
Median nTPM: 67.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 130.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 115.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 103.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 102.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 100.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 98.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 96.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 95.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 93.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 91.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 91.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 91.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 90.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 88.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 87.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 87.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 86.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 86.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 85.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 85.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 85.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 85.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 84.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 84.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 84.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 84.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 84.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 84.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 84.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 84.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 84.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 83.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 83.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 82.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 82.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 82.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 82.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 81.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 81.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 81.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 80.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 80.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 80.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 80.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 80.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 80.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 78.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 78.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 78.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 78.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 78.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 78.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 77.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 77.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 77.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 77.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 76.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 76.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 76.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 75.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 75.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 75.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 75.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 74.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 74.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 74.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 74.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 73.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 73.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 73.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 73.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 73.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 73.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 73.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 72.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 72.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 72.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 72.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 72.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 72.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 71.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 71.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 71.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 70.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 70.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 70.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 70.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 70.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 69.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 69.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 69.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 68.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 68.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 68.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 67.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 67.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 67.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 67.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 67.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 67.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 67.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 67.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 67.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 67.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 66.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 66.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 66.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 66.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 66.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 66.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 65.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 65.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 65.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 65.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 65.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 65.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 65.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 65.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 64.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 64.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 64.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 64.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 64.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 64.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 63.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 63.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 63.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 62.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 62.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 62.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 62.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 62.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 61.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 61.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 61.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 61.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 61.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 61.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 61.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 61.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 61.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 60.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 60.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 60.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 60.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 60.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 60.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 60.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 60.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 59.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 59.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 59.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 58.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 57.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 57.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 57.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 57.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 57.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 57.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 57.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 57.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 57.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 57.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 57.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 56.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 56.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 56.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 56.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 55.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 55.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 55.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 55.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 54.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 54.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 54.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 54.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 54.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 54.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 53.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 53.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 52.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 51.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 46.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 44.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 170.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.9
FF:10164-103B2 76 years, female 117.9
Globus pallidus
Scaled Tags Per Million: 147.6
FF:10175-103C4 60 years, female 159.4
FF:10161-103A8 76 years, female 135.8
Nucleus accumbens
Scaled Tags Per Million: 118.5
FF:10037-101F1 23-56 years, mixed 118.5
Putamen
Scaled Tags Per Million: 170.4
FF:10176-103C5 60 years, female 170.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 78.9
Pig sample Sample description nTPM
Caudate
nTPM: 65.4
Samples: 4

Max nTPM: 71.5
Min nTPM: 58.4
Sample A Female 69.3
Sample B Female 62.3
Sample C Male 71.5
Sample D Male 58.4
Putamen
nTPM: 78.9
Samples: 4

Max nTPM: 119.0
Min nTPM: 62.0
Sample A Female 68.7
Sample B Female 62.0
Sample C Male 119.0
Sample D Male 65.9
Septum
nTPM: 71.3
Samples: 4

Max nTPM: 76.6
Min nTPM: 66.3
Sample A Female 76.6
Sample B Female 66.3
Sample C Male 75.9
Sample D Male 66.5
Ventral pallidum
nTPM: 64.7
Samples: 4

Max nTPM: 67.6
Min nTPM: 61.4
Sample A Female 67.6
Sample B Female 67.0
Sample C Male 62.9
Sample D Male 61.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 122.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 121.9
Samples: 4

Max nTPM: 127.3
Min nTPM: 117.0
Sample A Male 119.9
Sample B Male 117.0
Sample C Female 127.3
Sample D Female 123.5
Septum
nTPM: 121.1
Samples: 4

Max nTPM: 127.2
Min nTPM: 105.1
Sample A Male 105.1
Sample B Male 125.0
Sample C Female 127.2
Sample D Female 127.2
Ventral forebrain
nTPM: 108.0
Samples: 4

Max nTPM: 116.4
Min nTPM: 104.2
Sample A Male 106.0
Sample B Male 104.2
Sample C Female 116.4
Sample D Female 105.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

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Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
413815 Antisense, RP_040809_01_F11, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.4
413815 Antisense, RP_040809_01_F11, Mouse strain C57BL/6J (56 days, male) 0.4

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