COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Medium
Peripheral nerve/ganglion: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:55.7 nTPM
HPA:55.7 nTPM
GTEx:52.5 nTPM
FANTOM5:143.0 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA042883Antibody HPA056437Antibody CAB033874
Endothelial cells Not detectedNot detectedNot detected
Glandular cells MediumMediumLow
Peripheral nerve/ganglion Not detectedNot detectedNot detected






COLON - HPA RNA-seqi
Average nTPM 55.7
overview
Male, age 54 		Colon sample 67
nTPM: 61.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 54.8
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 56.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 81.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 53.5
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 42.1
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 53.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 56.3
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 43
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 63.1
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 59.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 48.4
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 51.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 52.5
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 45.7
Samples: 373

Max nTPM: 99.7
Min nTPM: 30.8
Std nTPM: 7.8
Median nTPM: 44.7
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 99.7
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 91.5
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 81.4
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 72.4
GTEX-13113-1426-SM-5EGHU 60-69 years, female 71.7
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 65.9
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 65.8
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 64.7
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 64.3
GTEX-1PIEJ-1826-SM-EWRMN 20-29 years, female 64.2
GTEX-15G19-2726-SM-6LPKG 60-69 years, male 62.8
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Colon - Transverse
Average nTPM: 52.5
Samples: 406

Max nTPM: 150.6
Min nTPM: 28.4
Std nTPM: 14.9
Median nTPM: 48.9
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 150.6
GTEX-14JIY-3326-SM-6871E 60-69 years, male 109.7
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 107.3
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 99.2
GTEX-1H11D-2626-SM-9JGH4 40-49 years, male 94.6
GTEX-15RIF-1326-SM-6LPKO 20-29 years, male 93.8
GTEX-1K2DA-2026-SM-CGQGK 50-59 years, male 93.6
GTEX-1CAMR-0926-SM-7MXTD 20-29 years, male 92.5
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 91.8
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 89.8
GTEX-16AAH-1326-SM-7KFRG 50-59 years, male 89.1
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 143.0
FF:10014-101C5 62,83,84 years, mixed 143.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.