HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:49.0 nTPM
HPA:49.0 nTPM
GTEx:70.9 nTPM
FANTOM5:146.3 Scaled Tags Per Million
Pig:71.0 nTPM
Mouse:112.6 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042883Antibody HPA056437Antibody CAB033874
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.0
Sample id Sample description nTPM
Hippocampus
nTPM: 47.1
1898 Male, age 80, left hemisphere 50.3
2529 Female, age 94, left hemisphere 47.8
1855 Male, age 76, left hemisphere 46.6
2621 Female, age 67, right hemisphere 46.6
1911 Female, age 85, right hemisphere 46.4
2148 Female, age 91, left hemisphere 44.7
Dentate gyrus
nTPM: 45.9
2010 Male, age 76, both hemispheres 48.2
2530 Female, age 94, left hemisphere 47.2
1927 Female, age 91, both hemispheres 46.3
2246 Female, age 85, both hemispheres 45.5
2528 Male, age 74, both hemispheres 45.5
2531 Female, age 67, both hemispheres 42.9
Entorhinal gyrus
nTPM: 46.5
1938 Female, age 85, left hemisphere 49.3
1787 Male, age 76, left hemisphere 47.9
2764 Male, age 80, right hemisphere 46.5
2117 Female, age 91, right hemisphere 46.1
2686 Male, age 75, right hemisphere 45.1
2613 Female, age 94, left hemisphere 44.2
Hippocampus, CA1
nTPM: 47.5
2749 Male, age 80, left hemisphere 51.6
1873 Female, age 85, both hemispheres 48.1
2527 Male, age 74, both hemispheres 46.7
2045 Male, age 76, both hemispheres 46.5
2082 Female, age 91, right hemisphere 44.8
Hippocampus, CA2
nTPM: 47.2
1892 Male, age 76, both hemispheres 50.5
2249 Male, age 74, both hemispheres 48.0
1963 Male, age 80, left hemisphere 47.7
1940 Female, age 85, left hemisphere 46.2
2437 Female, age 94, left hemisphere 45.9
2113 Female, age 91, right hemisphere 45.2
Hippocampus, CA3
nTPM: 46.8
1867 Male, age 76, both hemispheres 49.0
2137 Male, age 80, left hemisphere 49.0
1891 Female, age 85, both hemispheres 48.7
2436 Male, age 74, both hemispheres 47.6
2620 Female, age 94, left hemisphere 43.6
2861 Female, age 67, both hemispheres 42.8
Parahippocampal cortex
nTPM: 46.9
1850 Male, age 80, both hemispheres 51.1
2018 Male, age 76, both hemispheres 48.6
1933 Female, age 85, both hemispheres 48.4
2245 Female, age 91, both hemispheres 46.7
2532 Female, age 72, left hemisphere 46.7
2250 Female, age 67, right hemisphere 46.6
2693 Female, age 94, both hemispheres 46.5
1990 Female, age 91, right hemisphere 46.4
2692 Male, age 74, both hemispheres 45.2
2622 Female, age 67, right hemisphere 42.8
Perirhinal gyrus
nTPM: 49.0
1841 Female, age 85, right hemisphere 50.2
1847 Female, age 91, left hemisphere 49.6
1794 Male, age 80, right hemisphere 49.0
2848 Male, age 76, right hemisphere 48.8
2521 Female, age 94, right hemisphere 47.3
Subiculum
nTPM: 46.9
1977 Female, age 85, both hemispheres 48.3
1901 Male, age 80, both hemispheres 47.9
2438 Female, age 94, left hemisphere 47.6
2042 Male, age 76, both hemispheres 46.9
2619 Male, age 74, both hemispheres 45.7
2729 Female, age 91, right hemisphere 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.9
Samples: 197

Max nTPM: 170.1
Min nTPM: 38.3
Std nTPM: 15.4
Median nTPM: 68.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 170.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 117.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 114.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 106.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 105.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 104.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 102.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 102.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 101.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 99.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 98.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 146.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 146.3
FF:10169-103B7 60 years, female 166.3
FF:10153-102I9 76 years, female 126.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 71.0
Samples: 4

Max nTPM: 96.0
Min nTPM: 55.2
Sample A Female 96.0
Sample B Female 63.3
Sample C Male 69.5
Sample D Male 55.2
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 75.1
Min nTPM: 48.1
Sample A Female 64.5
Sample B Female 75.1
Sample C Male 62.7
Sample D Male 48.1
Subiculum
nTPM: 65.7
Samples: 4

Max nTPM: 86.1
Min nTPM: 52.4
Sample A Female 86.1
Sample B Female 60.3
Sample C Male 52.4
Sample D Male 63.8
Ventral hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 71.2
Min nTPM: 48.9
Sample A Female 71.2
Sample B Female 48.9
Sample C Male 52.3
Sample D Male 61.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 105.6
Samples: 4

Max nTPM: 120.7
Min nTPM: 92.2
Sample A Male 102.9
Sample B Male 106.5
Sample C Female 120.7
Sample D Female 92.2
Hippocampal formation
nTPM: 112.6
Samples: 4

Max nTPM: 123.7
Min nTPM: 105.2
Sample A Male 123.7
Sample B Male 105.2
Sample C Female 110.4
Sample D Female 111.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
413815 Antisense, RP_040809_01_F11, Mouse strain C57BL/6J (56 days, male) 1.4

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