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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN ORAL MUCOSA OVARY
PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE
SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Squamous epithelial cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:56.5 nTPM
GTEx:56.5 nTPM
FANTOM5:128.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA042883Antibody HPA056437Antibody CAB033874
Squamous epithelial cells Not detectedNot detectedNot detected







VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 56.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 56.5
Samples: 156

Max nTPM: 103.1
Min nTPM: 34.0
Std nTPM: 14.3
Median nTPM: 52.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 103.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 96.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 95.2
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 95.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 91.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 85.8
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 85.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 84.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 83.7
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 82.0
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 81.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 80.5
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 79.6
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 79.0
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 78.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 78.0
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 76.5
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 76.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 76.1
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 75.9
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 74.0
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 73.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 72.9
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 71.6
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 71.3
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 70.2
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 70.0
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 69.4
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 69.3
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 69.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 68.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 67.7
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 67.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 67.6
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 66.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 66.7
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 66.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 65.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 65.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 65.0
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 64.6
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 63.8
GTEX-14PKU-1326-SM-6871B 40-49 years, female 63.2
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 62.8
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 62.8
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 62.7
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 62.5
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 62.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 62.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 62.3
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 62.3
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 61.7
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 61.7
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 61.5
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 60.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 60.3
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 60.3
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 59.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 59.2
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 59.1
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 58.7
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 57.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 57.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 56.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 56.1
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 55.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 55.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 55.4
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 55.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 54.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 54.7
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 54.6
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 54.6
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 53.9
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 53.6
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 53.3
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 53.2
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 53.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 52.7
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 52.6
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 51.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 51.7
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 51.7
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 51.7
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 51.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 51.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 51.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 51.2
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 50.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 50.8
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 50.5
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 50.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 50.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 50.1
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 49.8
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 49.7
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 49.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 49.5
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 49.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 49.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 49.0
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 48.6
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 48.6
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 48.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 48.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 48.2
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 47.8
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 47.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 47.4
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 47.3
GTEX-QCQG-1226-SM-48U23 50-59 years, female 47.1
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 46.9
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 46.8
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 46.7
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 46.4
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 46.1
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 45.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 45.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 45.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 45.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 45.1
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 44.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 44.7
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 44.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 44.6
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 44.2
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 44.2
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 44.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 43.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 43.9
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 43.7
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 43.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 43.2
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 42.7
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 42.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 42.4
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 42.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 42.1
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 41.6
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 41.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 40.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 39.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 39.7
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 39.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 39.0
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 38.9
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 38.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 38.6
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 38.6
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 36.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 35.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 35.6
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 35.5
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 35.4
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 35.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 34.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 128.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 128.1
FF:10204-103F6 68 years, female 128.1

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