HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:13.8 nTPM
HPA:13.8 nTPM
GTEx:11.8 nTPM
FANTOM5:48.1 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:35.5 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA073519
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.8
1911 Female, age 85, right hemisphere 13.3
2148 Female, age 91, left hemisphere 13.3
1855 Male, age 76, left hemisphere 12.5
2621 Female, age 67, right hemisphere 11.8
2529 Female, age 94, left hemisphere 10.9
1898 Male, age 80, left hemisphere 9.3
Dentate gyrus
nTPM: 13.1
2531 Female, age 67, both hemispheres 16.5
1927 Female, age 91, both hemispheres 13.7
2246 Female, age 85, both hemispheres 13.3
2528 Male, age 74, both hemispheres 13.2
2010 Male, age 76, both hemispheres 11.7
2530 Female, age 94, left hemisphere 10.6
Entorhinal gyrus
nTPM: 13.5
2613 Female, age 94, left hemisphere 15.5
2686 Male, age 75, right hemisphere 14.2
1938 Female, age 85, left hemisphere 13.7
1787 Male, age 76, left hemisphere 12.9
2764 Male, age 80, right hemisphere 12.6
2117 Female, age 91, right hemisphere 12.4
Hippocampus, CA1
nTPM: 12.8
2082 Female, age 91, right hemisphere 13.6
2045 Male, age 76, both hemispheres 13.2
1873 Female, age 85, both hemispheres 12.9
2749 Male, age 80, left hemisphere 12.4
2527 Male, age 74, both hemispheres 11.8
Hippocampus, CA2
nTPM: 12.2
2113 Female, age 91, right hemisphere 13.9
1940 Female, age 85, left hemisphere 13.0
2249 Male, age 74, both hemispheres 11.9
2437 Female, age 94, left hemisphere 11.9
1963 Male, age 80, left hemisphere 11.5
1892 Male, age 76, both hemispheres 11.2
Hippocampus, CA3
nTPM: 13.1
2620 Female, age 94, left hemisphere 15.1
2137 Male, age 80, left hemisphere 14.3
1891 Female, age 85, both hemispheres 13.9
2436 Male, age 74, both hemispheres 12.3
2861 Female, age 67, both hemispheres 12.0
1867 Male, age 76, both hemispheres 10.9
Parahippocampal cortex
nTPM: 13.8
2693 Female, age 94, both hemispheres 16.6
1850 Male, age 80, both hemispheres 14.8
2622 Female, age 67, right hemisphere 14.8
2532 Female, age 72, left hemisphere 14.2
1933 Female, age 85, both hemispheres 13.8
2245 Female, age 91, both hemispheres 13.4
2692 Male, age 74, both hemispheres 13.2
2250 Female, age 67, right hemisphere 13.0
2018 Male, age 76, both hemispheres 12.2
1990 Female, age 91, right hemisphere 12.1
Perirhinal gyrus
nTPM: 13.8
1841 Female, age 85, right hemisphere 15.6
2848 Male, age 76, right hemisphere 15.2
1794 Male, age 80, right hemisphere 14.1
2521 Female, age 94, right hemisphere 12.3
1847 Female, age 91, left hemisphere 12.1
Subiculum
nTPM: 12.7
2729 Female, age 91, right hemisphere 13.6
1977 Female, age 85, both hemispheres 13.3
2438 Female, age 94, left hemisphere 13.3
1901 Male, age 80, both hemispheres 12.6
2619 Male, age 74, both hemispheres 11.9
2042 Male, age 76, both hemispheres 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 21.7
Min nTPM: 7.3
Std nTPM: 2.0
Median nTPM: 11.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 19.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 18.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 18.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 17.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 16.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 15.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 15.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.1
FF:10153-102I9 76 years, female 53.3
FF:10169-103B7 60 years, female 42.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.7
Sample A Female 12.6
Sample B Female 12.1
Sample C Male 10.7
Sample D Male 11.6
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.4
Sample A Female 11.2
Sample B Female 11.4
Sample C Male 10.4
Sample D Male 9.4
Subiculum
nTPM: 10.7
Samples: 4

Max nTPM: 12.2
Min nTPM: 9.7
Sample A Female 12.2
Sample B Female 10.8
Sample C Male 10.2
Sample D Male 9.7
Ventral hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 11.7
Min nTPM: 10.0
Sample A Female 10.3
Sample B Female 10.0
Sample C Male 11.7
Sample D Male 11.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.7
Samples: 4

Max nTPM: 34.0
Min nTPM: 29.9
Sample A Male 33.5
Sample B Male 33.3
Sample C Female 34.0
Sample D Female 29.9
Hippocampal formation
nTPM: 35.5
Samples: 4

Max nTPM: 38.8
Min nTPM: 31.7
Sample A Male 38.8
Sample B Male 38.1
Sample C Female 33.5
Sample D Female 31.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
68667443 Antisense, RP_050201_02_C08, Mouse strain C57BL/6J (56 days, male) 7.6

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