BLNK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:12.6 FPKM
GTEx:3.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA038309

 

Antibody HPA038310

 

Antibody CAB009333

 

Antibody CAB016291

 

Endothelial cells

Not detected   Low   Medium   Not detected  

Glandular cells

Low   Not detected   Medium   High  

Peripheral nerve/ganglion

Not detected   Not detected   Medium   Not detected  
       
       
       

COLON - HPA RNA-seq

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Average FPKM

12.6

overview Male, age 54
Sample 1
FPKM: 13.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 12.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 13.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 7.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 13.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 17.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.7
Samples: 149

Max RPKM: 3
Min RPKM: 0
Std RPKM: 0.6
Median RPKM: 0.5
GTEX-WQUQ-2626-SM-4MVNP 3.0
GTEX-Y5LM-1426-SM-5RQJL 2.8
GTEX-147GR-2826-SM-5RQK8 2.6
GTEX-V955-1726-SM-4JBHF 2.6
GTEX-11ONC-1926-SM-5GU75 2.6
GTEX-13CF2-1826-SM-5N9GK 2.5
GTEX-YEC3-2026-SM-4WWFL 2.4
GTEX-1477Z-2126-SM-5Q5CM 2.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 5.9
Samples: 196

Max RPKM: 16.9
Min RPKM: 0
Std RPKM: 4.2
Median RPKM: 6.3
GTEX-ZVP2-1526-SM-5NQ82 16.9
GTEX-133LE-1526-SM-5IFEN 15.0
GTEX-WFG7-1526-SM-4LVMG 14.8
GTEX-XMK1-1726-SM-4B64Z 14.5
GTEX-147F3-1926-SM-5SIB9 14.0
GTEX-13O21-2426-SM-5MR4A 13.8
GTEX-12C56-0626-SM-5EGGC 13.7
GTEX-TML8-1326-SM-4DXTO 13.7
Show all