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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:146.4 nTPM
HPA:146.4 nTPM
GTEx:263.0 nTPM
FANTOM5:131.7 Scaled Tags Per Million
Pig:115.2 nTPM
Mouse:124.3 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041713Antibody HPA049578
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 146.4
Sample id Sample description nTPM
Hippocampus
nTPM: 144.2
2621 Female, age 67, right hemisphere 182.2
2529 Female, age 94, left hemisphere 159.8
1911 Female, age 85, right hemisphere 157.1
2148 Female, age 91, left hemisphere 142.6
2860 Male, age 74, right hemisphere 126.6
1898 Male, age 80, left hemisphere 121.2
1855 Male, age 76, left hemisphere 119.9
Dentate gyrus
nTPM: 129.1
2531 Female, age 67, both hemispheres 187.5
1927 Female, age 91, both hemispheres 133.2
2528 Male, age 74, both hemispheres 124.3
2246 Female, age 85, both hemispheres 116.2
2530 Female, age 94, left hemisphere 111.1
2010 Male, age 76, both hemispheres 102.6
Entorhinal gyrus
nTPM: 126.5
2686 Male, age 75, right hemisphere 145.0
2613 Female, age 94, left hemisphere 130.9
2764 Male, age 80, right hemisphere 126.5
1938 Female, age 85, left hemisphere 123.6
1787 Male, age 76, left hemisphere 122.6
2117 Female, age 91, right hemisphere 110.2
Hippocampus, CA1
nTPM: 118.3
2527 Male, age 74, both hemispheres 146.5
1873 Female, age 85, both hemispheres 133.7
2749 Male, age 80, left hemisphere 124.3
2082 Female, age 91, right hemisphere 107.3
2045 Male, age 76, both hemispheres 104.5
2343 Female, age 94, left hemisphere 93.6
Hippocampus, CA2
nTPM: 120.6
1963 Male, age 80, left hemisphere 152.8
2113 Female, age 91, right hemisphere 124.8
2342 Male, age 74, both hemispheres 124.3
2437 Female, age 94, left hemisphere 109.0
1940 Female, age 85, left hemisphere 108.8
1892 Male, age 76, both hemispheres 103.7
Hippocampus, CA3
nTPM: 146.4
2861 Female, age 67, both hemispheres 216.1
2620 Female, age 94, left hemisphere 174.6
2137 Male, age 80, left hemisphere 155.5
1867 Male, age 76, both hemispheres 117.8
1891 Female, age 85, both hemispheres 117.7
2436 Male, age 74, both hemispheres 96.9
Parahippocampal cortex
nTPM: 127.8
2622 Female, age 67, right hemisphere 159.7
2245 Female, age 91, both hemispheres 157.6
2718 Female, age 67, right hemisphere 139.7
2532 Female, age 72, left hemisphere 131.5
1933 Female, age 85, both hemispheres 129.0
2692 Male, age 74, both hemispheres 124.0
2018 Male, age 76, both hemispheres 114.4
2693 Female, age 94, both hemispheres 110.0
1990 Female, age 91, right hemisphere 106.8
1850 Male, age 80, both hemispheres 105.2
Perirhinal gyrus
nTPM: 121.0
1794 Male, age 80, right hemisphere 129.4
1841 Female, age 85, right hemisphere 125.3
1847 Female, age 91, left hemisphere 122.9
2521 Female, age 94, right hemisphere 119.4
2519 Male, age 75, right hemisphere 117.6
2848 Male, age 76, right hemisphere 111.5
Subiculum
nTPM: 106.9
2619 Male, age 74, both hemispheres 133.2
2729 Female, age 91, right hemisphere 118.4
1977 Female, age 85, both hemispheres 111.9
2042 Male, age 76, both hemispheres 106.1
1901 Male, age 80, both hemispheres 105.1
2702 Female, age 67, right hemisphere 87.2
2438 Female, age 94, left hemisphere 86.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 263.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 263.0
Samples: 197

Max nTPM: 829.8
Min nTPM: 53.0
Std nTPM: 129.9
Median nTPM: 248.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 829.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 753.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 704.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 681.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 613.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 564.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 558.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 555.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 494.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 493.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 490.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 131.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.7
FF:10153-102I9 76 years, female 168.2
FF:10169-103B7 60 years, female 95.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 115.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 77.5
Samples: 4

Max nTPM: 89.9
Min nTPM: 65.3
Sample A Female 89.9
Sample B Female 86.0
Sample C Male 65.3
Sample D Male 68.7
Entorhinal cortex
nTPM: 115.2
Samples: 4

Max nTPM: 153.1
Min nTPM: 91.7
Sample A Female 119.1
Sample B Female 91.7
Sample C Male 153.1
Sample D Male 97.0
Subiculum
nTPM: 90.0
Samples: 4

Max nTPM: 124.6
Min nTPM: 69.8
Sample A Female 124.6
Sample B Female 79.3
Sample C Male 86.1
Sample D Male 69.8
Ventral hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 101.3
Min nTPM: 54.9
Sample A Female 54.9
Sample B Female 61.3
Sample C Male 101.3
Sample D Male 95.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.3
Samples: 4

Max nTPM: 131.1
Min nTPM: 118.0
Sample A Male 131.1
Sample B Male 122.9
Sample C Female 118.0
Sample D Female 125.2
Hippocampal formation
nTPM: 98.5
Samples: 4

Max nTPM: 112.2
Min nTPM: 79.1
Sample A Male 109.3
Sample B Male 93.4
Sample C Female 79.1
Sample D Female 112.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
69059956 Antisense, RP_050317_04_G04, Mouse strain C57BL/6J (56 days, male) 10.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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