COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.8 nTPM
HPA:10.4 nTPM
GTEx:22.8 nTPM
FANTOM5:7.6 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA003422
Endothelial cells Not detected
Glandular cells Low


COLON - HPA RNA-seqi
Average nTPM 10.4
overview
Male, age 54 		Colon sample 67
nTPM: 12.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 10.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 12.5
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 8.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 14.6
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 8.7
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 11.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 9.7
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 6.2
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 9.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 12.3
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 11.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 22.8
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 22.7
Samples: 373

Max nTPM: 40.7
Min nTPM: 11.0
Std nTPM: 4.7
Median nTPM: 22.1
GTEX-1P4AB-2626-SM-DTXEU 50-59 years, male 40.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 36.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 36.4
GTEX-11EQ8-2626-SM-5N9BO 60-69 years, male 35.0
GTEX-1JJEA-2526-SM-CY8HJ 60-69 years, male 34.2
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 33.8
GTEX-1A3MX-2326-SM-718B4 60-69 years, male 33.7
GTEX-WHSE-2726-SM-EZ6ML 20-29 years, male 33.5
GTEX-15ER7-2826-SM-6PAN2 20-29 years, female 32.9
GTEX-1HB9E-2526-SM-D4P35 50-59 years, male 32.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 32.4
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Colon - Transverse
Average nTPM: 22.8
Samples: 406

Max nTPM: 44.2
Min nTPM: 12.9
Std nTPM: 4.7
Median nTPM: 22.3
GTEX-1399S-1926-SM-5J2M5 30-39 years, female 44.2
GTEX-1KANA-1926-SM-DHXKF 20-29 years, male 38.9
GTEX-1HSMQ-2726-SM-C1YRE 50-59 years, male 38.6
GTEX-XBEW-1926-SM-4SOJO 40-49 years, male 37.0
GTEX-UJMC-1326-SM-4IHLS 50-59 years, male 36.7
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 34.8
GTEX-OHPN-2026-SM-E9TIA 60-69 years, female 34.5
GTEX-XPVG-1826-SM-4B64X 50-59 years, male 34.4
GTEX-13OVJ-1726-SM-5IJDZ 50-59 years, female 34.0
GTEX-1HCU9-1326-SM-B2LXT 20-29 years, male 33.6
GTEX-1HSEH-1726-SM-B2LXH 60-69 years, male 33.3
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 7.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 7.6
FF:10014-101C5 62,83,84 years, mixed 7.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.