COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Low
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1.2 nTPM
HPA:0.2 nTPM
GTEx:1.2 nTPM
FANTOM5:1.0 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA002943
Endothelial cells Medium
Glandular cells High
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPM 0.2
overview
Male, age 54 		Colon sample 67
nTPM: 0.1
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 0.1
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 0
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 0.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 0.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 0.2
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 0.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 0.2
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 0.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 0
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 0.1
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 0.1
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 0.4
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 1.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 1.2
Samples: 373

Max nTPM: 7.3
Min nTPM: 0.1
Std nTPM: 0.7
Median nTPM: 1.1
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 7.3
GTEX-15RJE-2226-SM-6M46A 40-49 years, male 5.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 4.7
GTEX-1H3VE-2326-SM-9KNVU 40-49 years, male 3.8
GTEX-17HG3-1126-SM-7DUFC 30-39 years, female 3.4
GTEX-1HCU6-2926-SM-B2LWV 60-69 years, female 3.4
GTEX-1A32A-2626-SM-73KX9 50-59 years, female 3.2
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 2.9
GTEX-1JMPY-1026-SM-ARZN1 30-39 years, male 2.9
GTEX-1A3MV-1026-SM-72D5U 30-39 years, male 2.8
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 2.8
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Colon - Transverse
Average nTPM: 0.6
Samples: 406

Max nTPM: 3.6
Min nTPM: 0.0
Std nTPM: 0.5
Median nTPM: 0.5
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 3.6
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 2.3
GTEX-1LG7Y-2126-SM-DIPER 50-59 years, male 2.2
GTEX-U412-1726-SM-EZ6KX 60-69 years, male 2.2
GTEX-1JMLX-2726-SM-CM2SB 50-59 years, male 2.1
GTEX-WVJS-2426-SM-EZ6LI 50-59 years, male 2.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 2.0
GTEX-1GN73-2626-SM-9KNUQ 60-69 years, male 2.0
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 2.0
GTEX-1IDJF-1826-SM-CKZOE 20-29 years, male 2.0
GTEX-14C5O-2526-SM-73KU2 60-69 years, male 1.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 1.0
FF:10014-101C5 62,83,84 years, mixed 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.