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TISSUE PRIMARY DATA KIDNEY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Kidney
Tissue proteome
Kidney
KIDNEY - Expression summary
Protein expression
Kidneyi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Cells in glomeruli: Not detected
Cells in tubules: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:218.2 nTPM
HPA:41.0 nTPM
GTEx:218.2 nTPM

KIDNEY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA049871Antibody HPA074115
Cells in glomeruli LowNot detected
Cells in tubules HighMedium





KIDNEY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Read more
Average nTPM 41.0
overview
Female, age 58
Kidney sample 55
nTPM: 79.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
20

Fibroblasts:
5

Other cell types:
15

overview
Female, age 67
Kidney sample 56
nTPM: 63.7
Cell types%
Cells in tubules:
70

Cells in glomeruli:
15

Fibroblasts:
10

Other cell types:
5

overview
Female, age 55
Kidney sample 57
nTPM: 32.9
Cell types%
Cells in tubules:
80

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
5

overview
Male, age 46
Kidney sample 58
nTPM: 64.9
Cell types%
Cells in tubules:
60

Cells in glomeruli:
25

Fibroblasts:
5

Other cell types:
10

overview
Female, age 57
Kidney sample 358
nTPM: 18.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Kidney sample 377
nTPM: 20
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
5

Other cell types:
20

overview
Male, age 73
Kidney sample 380
nTPM: 52.2
Cell types%
Cells in tubules:
60

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
20

overview
Female, age 59
Kidney sample 394
nTPM: 19.4
Cell types%
Cells in tubules:
65

Cells in glomeruli:
10

Fibroblasts:
10

Other cell types:
15

overview
Female, age 48
Kidney sample 414
nTPM: 18.4
Cell types%
Cells in tubules:
60

Cells in glomeruli:
5

Fibroblasts:
10

Other cell types:
25


KIDNEY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 218.2
GTEx sample id Sample description nTPM
Kidney - Cortex
Average nTPM: 218.2
Samples: 85

Max nTPM: 568.6
Min nTPM: 55.4
Std nTPM: 103.6
Median nTPM: 182.4
GTEX-1JMPZ-1226-SM-ARU8Y 30-39 years, male 568.6
GTEX-13NYB-1726-SM-5N9G2 40-49 years, male 497.5
GTEX-14E6D-2526-SM-5YYA9 50-59 years, male 479.4
GTEX-T6MN-1826-SM-EXOHN 50-59 years, male 463.5
GTEX-14C5O-2026-SM-5YYB1 60-69 years, male 459.1
GTEX-O5YV-1226-SM-EV795 60-69 years, female 408.5
GTEX-T5JC-1526-SM-4DM68 20-29 years, male 400.9
GTEX-1JMQJ-1726-SM-E9U4V 50-59 years, male 387.9
GTEX-1R9PO-1626-SM-E6CPT 60-69 years, female 368.4
GTEX-P4QS-1126-SM-3NMD5 60-69 years, male 366.9
GTEX-11OF3-1326-SM-5N9FJ 60-69 years, male 344.9
GTEX-QDVN-1626-SM-48TZC 50-59 years, male 341.2
GTEX-1H3NZ-2126-SM-9WPQ6 60-69 years, male 335.0
GTEX-1497J-0826-SM-5NQAJ 60-69 years, male 304.8
GTEX-NPJ8-2226-SM-3TW8D 40-49 years, male 291.1
GTEX-1NV8Z-2226-SM-EXOJ2 60-69 years, male 280.8
GTEX-1HB9E-1826-SM-D4P33 50-59 years, male 280.3
GTEX-1KWVE-0826-SM-CXZKO 30-39 years, male 280.2
GTEX-1C6VQ-2326-SM-7IGN1 50-59 years, male 277.0
GTEX-1JMQK-1926-SM-CJI3B 60-69 years, male 276.9
GTEX-ZYT6-2226-SM-5GIC9 30-39 years, male 275.1
GTEX-REY6-1826-SM-EAZAT 60-69 years, male 274.3
GTEX-1JJ6O-2526-SM-AHZ3J 60-69 years, male 269.1
GTEX-17F96-1926-SM-7MGWY 70-79 years, male 263.9
GTEX-1GMR3-2426-SM-7MXV2 40-49 years, male 255.2
GTEX-13OW6-1826-SM-5N9F9 50-59 years, male 249.4
GTEX-1PWST-2226-SM-EVR3G 70-79 years, male 241.0
GTEX-14C39-2126-SM-664OH 40-49 years, male 239.2
GTEX-13RTJ-2226-SM-5S2Q1 60-69 years, male 236.4
GTEX-Y5V6-2026-SM-5IFHO 60-69 years, male 227.4
GTEX-1GF9W-1326-SM-7P8PX 60-69 years, male 225.8
GTEX-1IKK5-0926-SM-A9G2U 60-69 years, male 223.5
GTEX-1E2YA-1626-SM-7MGXS 50-59 years, male 219.1
GTEX-1GN1U-2126-SM-AHZ4J 50-59 years, female 213.8
GTEX-15CHQ-2126-SM-6871M 60-69 years, male 213.3
GTEX-1K9T9-1826-SM-CXZK2 50-59 years, female 213.2
GTEX-1J1OQ-1426-SM-AHZ3P 40-49 years, female 210.0
GTEX-1QP6S-1526-SM-EXUSG 40-49 years, male 199.8
GTEX-17HHY-2326-SM-7KFSR 50-59 years, male 188.6
GTEX-145MN-0326-SM-5QGQI 30-39 years, male 186.3
GTEX-1BAJH-1826-SM-731DA 70-79 years, male 183.8
GTEX-1HCU7-1826-SM-A9G2A 50-59 years, male 182.6
GTEX-1N2EF-1426-SM-EXUSH 60-69 years, male 182.4
GTEX-XPVG-0526-SM-4B65N 50-59 years, male 180.5
GTEX-ZYFG-1626-SM-5GZYY 60-69 years, female 180.2
GTEX-12WSG-0826-SM-5EQ5A 50-59 years, female 177.6
GTEX-QDT8-1726-SM-EYYV6 30-39 years, female 177.6
GTEX-15DYW-2026-SM-6AJBD 60-69 years, female 177.2
GTEX-1GTWX-1826-SM-9QEHG 60-69 years, male 175.4
GTEX-Y5V5-1226-SM-EYYVP 60-69 years, female 173.1
GTEX-13OVL-1826-SM-5KLZR 50-59 years, male 170.3
GTEX-ZDXO-0226-SM-4WKH7 60-69 years, male 170.2
GTEX-ZC5H-1726-SM-5HL7X 40-49 years, female 166.4
GTEX-13112-2126-SM-5GCO4 50-59 years, male 164.7
GTEX-11TTK-1926-SM-5PNW8 60-69 years, female 164.3
GTEX-1CB4J-1926-SM-7MGX8 60-69 years, male 162.3
GTEX-1GF9V-1926-SM-9JGHE 60-69 years, male 159.2
GTEX-16MT8-1926-SM-7EPGL 60-69 years, female 158.9
GTEX-1EKGG-2226-SM-7IGOA 60-69 years, male 158.0
GTEX-QLQW-1626-SM-CMKFE 30-39 years, male 155.2
GTEX-1A8FM-2026-SM-7P8RN 50-59 years, female 153.9
GTEX-13O1R-2526-SM-5N9FW 60-69 years, male 153.2
GTEX-1HBPI-2026-SM-CE6RZ 50-59 years, male 152.3
GTEX-S33H-1426-SM-EZ6L7 30-39 years, male 152.3
GTEX-1F48J-2226-SM-7MXTN 50-59 years, female 152.0
GTEX-1OJC4-2326-SM-DTXA5 50-59 years, female 150.8
GTEX-1MUQO-2526-SM-E9TJN 60-69 years, male 145.4
GTEX-1I1GP-1926-SM-CNNQU 50-59 years, male 145.3
GTEX-1H3VY-1926-SM-9JGHJ 50-59 years, male 140.9
GTEX-1N2DW-1826-SM-EAZ54 50-59 years, male 140.6
GTEX-12696-0926-SM-5FQTV 60-69 years, male 135.8
GTEX-ZLFU-0926-SM-5P9F8 40-49 years, male 134.3
GTEX-1LG7Y-2726-SM-D5OVW 50-59 years, male 133.2
GTEX-17F97-1926-SM-7IGM4 50-59 years, male 126.3
GTEX-1JMLX-1526-SM-AHZ3N 50-59 years, male 123.5
GTEX-ZVZP-0926-SM-5GIDB 50-59 years, male 118.3
GTEX-1399S-0526-SM-5IJG8 30-39 years, female 118.1
GTEX-1AX8Z-2326-SM-731CR 60-69 years, male 117.5
GTEX-11GS4-2326-SM-5A5KS 60-69 years, male 115.0
GTEX-1A3MW-2226-SM-73KUX 60-69 years, female 104.6
GTEX-1IL2V-1826-SM-ARU7R 70-79 years, male 97.3
GTEX-13OVI-1126-SM-5KLZF 60-69 years, female 87.8
GTEX-147F4-2626-SM-5Q5CS 50-59 years, male 82.7
GTEX-RN64-1626-SM-48FD7 50-59 years, male 55.7
GTEX-ZE9C-1426-SM-4WKGM 60-69 years, male 55.4
Show allShow less
Kidney - Medulla
Average nTPM: 167.1
Samples: 4

Max nTPM: 264.2
Min nTPM: 109.6
Std nTPM: 62.2
Median nTPM: 147.2
GTEX-RU72-1926-SM-EAZ3F 50-59 years, female 264.2
GTEX-T5JC-1626-SM-EZ6KW 20-29 years, male 178.8
GTEX-TKQ2-0626-SM-EZ6LB 50-59 years, male 115.7
GTEX-R55E-2026-SM-EZ6L1 20-29 years, male 109.6

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.