HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:33.2 nTPM
HPA Brain:33.6 nTPM
GTEx:33.2 nTPM
FANTOM5:31.2 Scaled Tags Per Million
Pig:33.2 nTPM
Mouse:29.7 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.3
1898 Male, age 80, left hemisphere 36.2
2529 Female, age 94, left hemisphere 35.7
2148 Female, age 91, left hemisphere 33.0
1911 Female, age 85, right hemisphere 31.9
1855 Male, age 76, left hemisphere 29.8
2621 Female, age 67, right hemisphere 27.3
Dentate gyrus
nTPM: 32.9
2528 Male, age 74, both hemispheres 38.9
2530 Female, age 94, left hemisphere 36.8
2010 Male, age 76, both hemispheres 35.2
2246 Female, age 85, both hemispheres 34.9
2531 Female, age 67, both hemispheres 28.4
1927 Female, age 91, both hemispheres 23.3
Entorhinal gyrus
nTPM: 33.6
2117 Female, age 91, right hemisphere 46.9
1787 Male, age 76, left hemisphere 32.9
2764 Male, age 80, right hemisphere 31.5
1938 Female, age 85, left hemisphere 31.3
2686 Male, age 75, right hemisphere 31.0
2613 Female, age 94, left hemisphere 28.0
Hippocampus, CA1
nTPM: 31.6
2082 Female, age 91, right hemisphere 35.0
2527 Male, age 74, both hemispheres 34.3
2749 Male, age 80, left hemisphere 31.6
1873 Female, age 85, both hemispheres 31.0
2045 Male, age 76, both hemispheres 26.4
Hippocampus, CA2
nTPM: 32.3
2249 Male, age 74, both hemispheres 38.9
1963 Male, age 80, left hemisphere 37.0
2437 Female, age 94, left hemisphere 33.5
2113 Female, age 91, right hemisphere 33.3
1940 Female, age 85, left hemisphere 27.1
1892 Male, age 76, both hemispheres 24.0
Hippocampus, CA3
nTPM: 31.9
2436 Male, age 74, both hemispheres 41.1
2861 Female, age 67, both hemispheres 33.8
1891 Female, age 85, both hemispheres 32.1
2620 Female, age 94, left hemisphere 29.8
1867 Male, age 76, both hemispheres 29.1
2137 Male, age 80, left hemisphere 25.4
Parahippocampal cortex
nTPM: 30.6
2692 Male, age 74, both hemispheres 34.7
2250 Female, age 67, right hemisphere 34.6
2245 Female, age 91, both hemispheres 31.8
1990 Female, age 91, right hemisphere 30.9
1933 Female, age 85, both hemispheres 30.7
2622 Female, age 67, right hemisphere 30.6
2532 Female, age 72, left hemisphere 28.8
2018 Male, age 76, both hemispheres 28.5
1850 Male, age 80, both hemispheres 28.3
2693 Female, age 94, both hemispheres 26.9
Perirhinal gyrus
nTPM: 26.8
1847 Female, age 91, left hemisphere 30.6
1794 Male, age 80, right hemisphere 28.4
2521 Female, age 94, right hemisphere 27.1
1841 Female, age 85, right hemisphere 25.8
2848 Male, age 76, right hemisphere 22.3
Subiculum
nTPM: 33.0
2729 Female, age 91, right hemisphere 36.1
2619 Male, age 74, both hemispheres 35.7
2042 Male, age 76, both hemispheres 35.0
1977 Female, age 85, both hemispheres 34.9
1901 Male, age 80, both hemispheres 30.7
2438 Female, age 94, left hemisphere 25.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 86.1
Min nTPM: 16.7
Std nTPM: 8.9
Median nTPM: 31.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 86.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 58.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 57.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 55.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 52.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 49.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 49.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 48.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 48.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.2
FF:10153-102I9 76 years, female 38.7
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.2
Pig sample Sample description nTPM
Subiculum
nTPM: 31.2
Samples: 4

Max nTPM: 37.2
Min nTPM: 28.4
Sample A Female 37.2
Sample B Female 28.7
Sample C Male 30.6
Sample D Male 28.4
Dorsal hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 38.1
Min nTPM: 23.4
Sample A Female 38.1
Sample B Female 26.3
Sample C Male 34.4
Sample D Male 23.4
Entorhinal cortex
nTPM: 27.2
Samples: 4

Max nTPM: 31.4
Min nTPM: 22.3
Sample A Female 26.3
Sample B Female 28.7
Sample C Male 31.4
Sample D Male 22.3
Ventral hippocampus
nTPM: 33.2
Samples: 4

Max nTPM: 45.5
Min nTPM: 25.0
Sample A Female 33.4
Sample B Female 25.0
Sample C Male 45.5
Sample D Male 29.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 29.8
Min nTPM: 24.5
Sample A Male 24.7
Sample B Male 24.5
Sample C Female 27.5
Sample D Female 29.8
Hippocampal formation
nTPM: 29.7
Samples: 4

Max nTPM: 34.6
Min nTPM: 26.7
Sample A Male 30.0
Sample B Male 26.7
Sample C Female 27.5
Sample D Female 34.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
77454675 Antisense, RP_070129_01_C07, Mouse strain C57BL/6J (56 days, male) 1.2
2587 Antisense, RP_040507_01_F10, Mouse strain C57BL/6J (56 days, male) 0.9

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