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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:50.1 nTPM
FANTOM5:227.1 Scaled Tags Per Million
Pig:49.6 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 21.1
2816 Male, age 47, midline 22.0
2048 Male, age 55, midline 21.6
1981 Female, age 72, midline 21.4
2194 Female, age 79, both hemispheres 20.5
2565 Male, age 75, midline 20.1
Cervical spinal cord, dorsal horn
nTPM: 21.6
2173 Female, age 72, unknown 22.3
1877 Male, age 55, unknown 22.2
2297 Male, age 75, both hemispheres 21.8
2296 Male, age 66, both hemispheres 21.2
2721 Male, age 90, both hemispheres 21.2
2069 Male, age 47, both hemispheres 20.8
Cervical spinal cord, ventral horn
nTPM: 22.0
2068 Male, age 55, unknown 22.6
2295 Male, age 66, both hemispheres 22.5
2820 Female, age 79, both hemispheres 22.2
2098 Female, age 72, unknown 21.8
2480 Male, age 75, both hemispheres 21.7
2809 Male, age 90, both hemispheres 21.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.1
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 50.1
Samples: 159

Max nTPM: 109.7
Min nTPM: 12.9
Std nTPM: 18.6
Median nTPM: 46.3
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 109.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 100.9
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 98.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 98.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 94.9
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 91.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 91.0
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 91.0
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 86.8
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 85.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 84.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 84.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 83.6
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 80.8
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 79.4
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 79.3
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 75.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 74.5
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 73.5
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 71.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 70.6
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 70.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 68.0
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 67.6
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 66.9
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 66.4
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 66.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 65.0
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 64.9
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 64.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 64.6
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 64.5
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 63.8
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 62.0
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 61.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 61.5
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 61.2
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 61.1
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 59.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 59.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 59.0
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 58.6
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 58.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 58.3
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 57.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 56.7
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 56.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 56.5
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 55.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 55.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 55.2
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 54.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 54.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 54.4
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 54.3
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 54.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 54.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 54.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 54.1
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 53.9
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 53.8
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 53.5
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 52.4
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 51.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 50.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 50.4
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 50.3
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 50.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 50.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 49.9
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 49.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 49.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 49.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 48.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 47.4
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 47.3
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 47.1
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 46.7
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 46.4
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 46.3
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 46.3
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 46.2
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 46.0
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 45.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 45.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 45.5
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 44.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 44.7
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 44.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 44.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 44.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 44.0
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 43.9
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 43.7
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 43.2
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 43.1
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 42.8
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 42.4
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 42.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 42.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 41.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 41.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 41.7
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 41.7
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 41.7
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 41.1
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 41.1
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 40.8
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 40.8
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 40.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 40.5
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 40.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 39.9
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 39.5
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 39.3
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 39.2
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 37.9
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 37.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 37.2
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 37.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 36.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 36.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 36.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 35.6
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 35.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 35.1
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 34.9
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 34.6
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 34.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 34.1
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 33.8
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 33.8
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 33.7
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 33.5
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 33.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 33.2
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 32.9
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 32.8
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 30.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 29.4
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 29.3
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 28.7
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 28.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 28.1
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 27.8
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 27.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 27.1
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 26.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 25.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 25.1
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 24.6
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 22.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 22.3
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 21.7
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 21.0
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 20.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 19.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 19.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 12.9
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 227.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 227.1
FF:10159-103A6 76 years, female 241.5
FF:10181-103D1 60 years, female 212.7

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 49.6
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 49.7
Samples: 4

Max nTPM: 63.9
Min nTPM: 43.8
Sample A Female 43.8
Sample B Female 46.4
Sample C Male 63.9
Sample D Male 44.5
Ventral spinal cord
nTPM: 48.8
Samples: 4

Max nTPM: 53.4
Min nTPM: 46.0
Sample A Female 46.3
Sample B Female 49.5
Sample C Male 53.4
Sample D Male 46.0

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