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SNU13
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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:157.7 nTPM
HPA:157.7 nTPM
GTEx:48.2 nTPM
FANTOM5:177.9 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:110.1 nTPM
Allen mouse:1.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA029199
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 157.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 140.8
2481 Female, age 94, left hemisphere 147.0
1781 Male, age 74, unknown 145.9
2288 Male, age 75, left hemisphere 145.8
2846 Female, age 79, unknown 140.5
1857 Female, age 85, left hemisphere 140.1
2290 Female, age 72, unknown 140.1
1854 Male, age 80, left hemisphere 138.8
2289 Male, age 61, right hemisphere 128.6
Claustrum
nTPM: 140.1
2198 Male, age 80, both hemispheres 149.0
2491 Male, age 75, both hemispheres 146.9
2284 Female, age 91, both hemispheres 142.5
2392 Female, age 94, both hemispheres 141.7
1956 Male, age 74, unknown 139.5
2568 Male, age 61, both hemispheres 139.2
2196 Female, age 79, unknown 138.7
2645 Female, age 72, unknown 133.5
2292 Female, age 85, both hemispheres 130.1
Globus pallidus, externus
nTPM: 135.3
2772 Female, age 79, unknown 148.1
2395 Male, age 75, both hemispheres 143.2
1996 Male, age 80, right hemisphere 137.7
2646 Male, age 61, right hemisphere 124.8
2567 Female, age 72, unknown 122.7
Globus pallidus, internus
nTPM: 136.1
2287 Male, age 75, right hemisphere 157.6
2483 Female, age 94, right hemisphere 147.9
1818 Male, age 74, unknown 138.0
2778 Female, age 91, both hemispheres 135.1
2037 Male, age 80, right hemisphere 128.8
2566 Female, age 72, unknown 128.0
2111 Female, age 85, right hemisphere 117.3
Nucleus accumbens
nTPM: 144.6
1856 Female, age 91, right hemisphere 160.7
2286 Male, age 75, left hemisphere 149.3
1783 Male, age 74, unknown 144.6
2824 Male, age 61, right hemisphere 143.7
2698 Female, age 72, unknown 142.5
2391 Female, age 94, left hemisphere 142.3
1806 Female, age 85, left hemisphere 140.6
2732 Male, age 80, right hemisphere 133.4
Nucleus basalis of Meynert
nTPM: 133.2
2821 Male, age 75, both hemispheres 136.0
2484 Female, age 94, left hemisphere 135.6
2393 Male, age 80, right hemisphere 135.4
2569 Male, age 61, both hemispheres 125.7
Nucleus of the diagonal band
nTPM: 157.7
1812 Female, age 91, both hemispheres 166.8
2775 Male, age 80, right hemisphere 164.3
2195 Female, age 85, both hemispheres 158.1
2029 Male, age 61, right hemisphere 153.0
1979 Male, age 74, unknown 146.4
Olfactory tubercle
nTPM: 152.6
1998 Female, age 91, both hemispheres 165.3
1846 Male, age 80, right hemisphere 158.2
2487 Female, age 94, left hemisphere 146.0
2856 Male, age 75, right hemisphere 140.7
Putamen
nTPM: 137.4
1838 Male, age 80, right hemisphere 145.8
1937 Female, age 91, right hemisphere 144.9
2466 Female, age 79, unknown 143.4
2482 Female, age 94, left hemisphere 143.2
1829 Male, age 74, unknown 132.1
2647 Male, age 75, left hemisphere 131.1
2489 Female, age 72, unknown 121.5
Septal nuclei
nTPM: 151.6
1960 Male, age 74, unknown 169.5
2031 Female, age 72, unknown 166.9
2009 Female, age 91, both hemispheres 160.4
2629 Female, age 94, right hemisphere 151.0
2059 Female, age 85, both hemispheres 143.9
2394 Male, age 61, left hemisphere 135.9
2199 Male, age 80, right hemisphere 133.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 48.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 40.7
Samples: 246

Max nTPM: 95.5
Min nTPM: 10.7
Std nTPM: 17.7
Median nTPM: 39.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 95.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 91.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 86.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 85.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 84.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 83.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 80.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 77.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 74.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 72.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 72.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 71.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 70.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 69.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 67.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 64.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 64.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 63.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 63.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 62.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 62.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 61.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 60.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 60.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 60.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 60.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 59.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 59.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 59.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 58.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 58.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 58.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 58.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 57.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 56.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 56.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 56.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 56.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 56.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 55.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 55.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 55.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 55.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 55.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 55.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 55.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 55.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 55.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 55.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 53.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 53.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 53.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 53.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 53.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 53.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 53.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 52.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 52.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 51.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 51.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 51.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 50.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 50.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 50.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 50.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 50.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 50.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 50.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 50.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 49.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 49.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 48.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 47.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 47.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 46.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 46.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 46.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 46.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 46.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 46.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 45.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 45.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 45.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 44.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 44.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 44.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 43.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 43.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 43.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 42.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 42.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 42.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 42.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 42.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 41.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 41.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 41.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 41.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 41.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 41.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 40.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 40.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 39.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 39.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 38.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 38.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 38.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 38.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 38.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 38.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 37.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 37.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 37.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 37.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 37.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 36.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 36.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 36.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 36.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 35.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 35.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 35.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 35.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 34.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 34.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 34.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 34.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 33.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 33.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 33.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 33.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 32.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 32.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 32.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 32.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 32.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 32.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 31.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 31.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 31.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 31.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 30.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 30.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 29.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 29.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 29.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 28.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 28.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 28.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 28.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 27.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 27.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 26.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 26.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 26.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 25.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 25.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 25.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 25.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 25.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 25.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 24.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 24.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 24.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 24.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 23.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 23.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 23.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 22.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 22.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 22.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 22.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 21.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 21.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 21.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 21.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 21.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 21.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 20.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 19.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 19.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 19.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 18.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 17.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 17.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 17.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 16.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 16.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 15.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 14.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 14.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 14.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 14.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 14.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 14.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 13.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 13.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 13.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 12.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 12.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 12.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 11.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 11.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 11.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 48.2
Samples: 246

Max nTPM: 129.7
Min nTPM: 6.6
Std nTPM: 20.1
Median nTPM: 48.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 129.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 115.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 114.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 104.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 102.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 101.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 90.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 87.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 85.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 83.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 80.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 80.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 79.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 79.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 79.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 78.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 78.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 78.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 77.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 76.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 75.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 73.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 72.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 71.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 71.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 71.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 70.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 70.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 70.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 68.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 68.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 68.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 68.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 67.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 67.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 66.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 66.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 66.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 66.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 65.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 65.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 65.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 65.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 64.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 64.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 64.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 64.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 63.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 62.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 62.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 62.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 62.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 62.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 61.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 61.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 61.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 61.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 60.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 60.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 60.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 60.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 60.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 59.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 59.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 59.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 59.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 59.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 58.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 58.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 58.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 57.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 57.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 57.6
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 57.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 57.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 57.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 56.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 55.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 55.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 55.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 55.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 55.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 55.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 55.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 55.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 55.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 54.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 54.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 54.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 53.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 53.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 53.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 52.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 52.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 52.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 52.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 52.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 52.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 51.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 51.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 51.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 51.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 51.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 51.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 51.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 50.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 50.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 50.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 50.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 50.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 50.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 49.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 49.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 49.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 49.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 48.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 48.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 48.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 48.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 47.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 47.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 47.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 46.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 46.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 46.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 46.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 46.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 46.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 46.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 46.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 44.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 44.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 43.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 43.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 43.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 43.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 43.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 42.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 42.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 41.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 41.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 41.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 41.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 40.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 40.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 40.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 40.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 39.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 39.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 39.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 39.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 39.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 38.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 38.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 38.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 38.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 38.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 37.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 37.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 37.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 37.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 36.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 36.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 36.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 36.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 35.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 35.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 35.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 35.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 35.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 34.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 33.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 33.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 32.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 32.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 32.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 30.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 30.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 30.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 30.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 29.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 29.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 29.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 29.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 29.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 28.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 28.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 28.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 28.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 27.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 27.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 27.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 26.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 25.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 25.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 25.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 24.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 24.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 24.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 24.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 23.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 22.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 22.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 21.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 20.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 20.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 20.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 20.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 20.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 19.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 18.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 18.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 18.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 17.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 17.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 17.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 16.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 16.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 16.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 16.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 15.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 15.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 14.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 12.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 12.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 9.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 6.6
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Brain - Putamen (basal ganglia)
Average nTPM: 39.8
Samples: 205

Max nTPM: 91.5
Min nTPM: 6.8
Std nTPM: 18.8
Median nTPM: 35.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 91.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 90.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 88.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 88.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 80.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 79.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 78.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 78.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 77.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 75.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 72.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 72.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 72.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 71.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 70.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 70.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 70.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 69.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 67.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 67.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 66.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 66.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 66.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 64.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 63.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 61.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 61.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 61.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 60.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 59.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 59.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 59.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 59.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 58.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 57.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 57.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 57.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 56.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 55.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 54.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 54.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 54.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 54.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 52.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.6
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 51.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 50.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 50.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 50.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 49.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 49.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 48.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 48.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 47.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 46.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 46.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 46.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 45.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 45.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 44.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 44.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 44.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 44.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 44.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 44.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 43.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 43.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 43.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 43.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 42.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 42.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 42.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 41.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 41.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 40.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 40.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 40.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 39.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 39.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 39.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 39.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 38.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 38.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 38.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 37.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 37.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 37.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 37.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 36.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 35.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 35.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 35.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 35.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 34.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 34.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 34.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 33.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 33.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 33.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 33.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 33.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 33.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 32.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 32.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 32.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 31.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 31.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 31.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 31.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 31.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 31.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 31.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 30.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 30.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 30.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 30.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 30.0
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 29.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 29.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 28.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 28.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 28.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 28.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 28.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 27.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 27.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 27.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 27.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 27.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 26.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 26.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 25.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 25.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 24.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 24.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 23.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 23.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 23.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 23.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 23.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 23.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 22.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 21.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 21.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 21.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 20.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 20.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 20.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 20.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 20.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 19.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 19.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 19.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 19.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 18.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 17.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 17.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 17.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 17.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 17.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 16.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 16.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 16.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 16.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 16.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 15.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 15.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 15.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 14.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 13.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 13.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 12.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 12.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 12.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 6.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

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Max Scaled Tags Per Million 177.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 132.6
FF:10164-103B2 76 years, female 132.6
Globus pallidus
Scaled Tags Per Million: 107.0
FF:10175-103C4 60 years, female 114.4
FF:10161-103A8 76 years, female 99.5
Nucleus accumbens
Scaled Tags Per Million: 177.9
FF:10037-101F1 23-56 years, mixed 177.9
Putamen
Scaled Tags Per Million: 166.8
FF:10176-103C5 60 years, female 166.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
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Average nTPM 0.1
Pig sample Sample description nTPM
Caudate
nTPM: 0.1
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.1
Sample C Male 0.1
Sample D Male 0.1
Putamen
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.3
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Septum
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.3
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.0
Ventral pallidum
nTPM: 0.1
Samples: 4

Max nTPM: 0.3
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.3
Sample D Male 0.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 110.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 91.1
Samples: 4

Max nTPM: 94.4
Min nTPM: 88.1
Sample A Male 92.5
Sample B Male 94.4
Sample C Female 88.1
Sample D Female 89.5
Septum
nTPM: 110.1
Samples: 4

Max nTPM: 126.5
Min nTPM: 97.6
Sample A Male 100.4
Sample B Male 126.5
Sample C Female 116.0
Sample D Female 97.6
Ventral forebrain
nTPM: 94.2
Samples: 4

Max nTPM: 110.7
Min nTPM: 81.7
Sample A Male 85.9
Sample B Male 98.5
Sample C Female 110.7
Sample D Female 81.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.6
68633125 Antisense, RP_050125_02_D11, Mouse strain C57BL/6J (56 days, male) 1.6
Pallidum
Expression energy: 1.6
68633125 Antisense, RP_050125_02_D11, Mouse strain C57BL/6J (56 days, male) 1.6

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