HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:8.7 nTPM
HPA:8.7 nTPM
GTEx:9.5 nTPM
FANTOM5:23.6 Scaled Tags Per Million
Pig:10.1 nTPM
Mouse:15.8 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043480
Glial cells Low
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.7
Sample id Sample description nTPM
Hippocampus
nTPM: 8.7
1911 Female, age 85, right hemisphere 10.5
2529 Female, age 94, left hemisphere 10.3
2621 Female, age 67, right hemisphere 8.7
2148 Female, age 91, left hemisphere 8.1
1898 Male, age 80, left hemisphere 7.6
1855 Male, age 76, left hemisphere 7.0
Dentate gyrus
nTPM: 8.0
2530 Female, age 94, left hemisphere 11.2
2531 Female, age 67, both hemispheres 8.5
2010 Male, age 76, both hemispheres 8.0
2528 Male, age 74, both hemispheres 7.6
1927 Female, age 91, both hemispheres 6.8
2246 Female, age 85, both hemispheres 6.1
Entorhinal gyrus
nTPM: 5.0
2117 Female, age 91, right hemisphere 7.7
2686 Male, age 75, right hemisphere 5.5
2764 Male, age 80, right hemisphere 5.3
1787 Male, age 76, left hemisphere 4.6
2613 Female, age 94, left hemisphere 4.0
1938 Female, age 85, left hemisphere 2.8
Hippocampus, CA1
nTPM: 7.4
2749 Male, age 80, left hemisphere 9.6
2527 Male, age 74, both hemispheres 8.4
2045 Male, age 76, both hemispheres 7.0
2082 Female, age 91, right hemisphere 6.6
1873 Female, age 85, both hemispheres 5.6
Hippocampus, CA2
nTPM: 7.2
1963 Male, age 80, left hemisphere 10.5
2437 Female, age 94, left hemisphere 9.0
2249 Male, age 74, both hemispheres 7.8
1892 Male, age 76, both hemispheres 6.1
2113 Female, age 91, right hemisphere 5.6
1940 Female, age 85, left hemisphere 4.4
Hippocampus, CA3
nTPM: 8.2
2137 Male, age 80, left hemisphere 10.9
1867 Male, age 76, both hemispheres 8.7
1891 Female, age 85, both hemispheres 7.6
2861 Female, age 67, both hemispheres 7.5
2436 Male, age 74, both hemispheres 7.3
2620 Female, age 94, left hemisphere 7.3
Parahippocampal cortex
nTPM: 4.0
2018 Male, age 76, both hemispheres 7.0
2245 Female, age 91, both hemispheres 6.3
2692 Male, age 74, both hemispheres 5.8
2532 Female, age 72, left hemisphere 4.2
1990 Female, age 91, right hemisphere 4.0
1933 Female, age 85, both hemispheres 2.7
2250 Female, age 67, right hemisphere 2.6
1850 Male, age 80, both hemispheres 2.5
2693 Female, age 94, both hemispheres 2.5
2622 Female, age 67, right hemisphere 2.1
Perirhinal gyrus
nTPM: 2.1
2848 Male, age 76, right hemisphere 3.0
1794 Male, age 80, right hemisphere 2.5
2521 Female, age 94, right hemisphere 2.3
1847 Female, age 91, left hemisphere 1.8
1841 Female, age 85, right hemisphere 1.1
Subiculum
nTPM: 8.1
2042 Male, age 76, both hemispheres 11.8
1901 Male, age 80, both hemispheres 10.8
2438 Female, age 94, left hemisphere 7.4
2619 Male, age 74, both hemispheres 6.5
2729 Female, age 91, right hemisphere 6.4
1977 Female, age 85, both hemispheres 5.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 25.2
Min nTPM: 1.7
Std nTPM: 3.9
Median nTPM: 9.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 25.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 22.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 18.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 18.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 18.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 18.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 18.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 17.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 16.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.6
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 23.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 14.0
Min nTPM: 6.5
Sample A Female 11.0
Sample B Female 8.9
Sample C Male 14.0
Sample D Male 6.5
Entorhinal cortex
nTPM: 7.3
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 7.6
Sample C Male 7.4
Sample D Male 7.6
Subiculum
nTPM: 7.6
Samples: 4

Max nTPM: 8.2
Min nTPM: 7.3
Sample A Female 7.5
Sample B Female 7.3
Sample C Male 8.2
Sample D Male 7.4
Ventral hippocampus
nTPM: 9.6
Samples: 4

Max nTPM: 11.8
Min nTPM: 7.3
Sample A Female 8.1
Sample B Female 7.3
Sample C Male 11.8
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 14.1
Min nTPM: 8.9
Sample A Male 14.1
Sample B Male 11.1
Sample C Female 12.5
Sample D Female 8.9
Hippocampal formation
nTPM: 15.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 11.7
Sample A Male 11.7
Sample B Male 15.5
Sample C Female 18.6
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
74076240 Antisense, RP_051219_03_A08, Mouse strain C57BL/6J (56 days, male) 0.9
71152294 Antisense, RP_050719_03_F11, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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