VRK1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:9.0 FPKM
GTEx:2.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA000660

 

Antibody HPA017929

 

Endothelial cells

Not detected   Not detected  

Glandular cells

Low   Not detected  

Peripheral nerve/ganglion

Not detected   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

9.0

overview Male, age 54
Sample 1
FPKM: 5.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 7.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 7.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 15.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

2.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 2.3
Samples: 149

Max RPKM: 4.1
Min RPKM: 1
Std RPKM: 0.6
Median RPKM: 2.2
GTEX-1399U-2226-SM-5KLZI 4.1
GTEX-Y9LG-1326-SM-4VBQB 4.0
GTEX-XBED-1726-SM-47JYO 4.0
GTEX-13VXT-2026-SM-5L3EW 3.9
GTEX-ZVT2-1726-SM-51MRO 3.8
GTEX-13FH7-1626-SM-5J2O9 3.7
GTEX-13X6K-2726-SM-5O9DG 3.5
GTEX-WQUQ-2626-SM-4MVNP 3.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 3.4
Samples: 196

Max RPKM: 8.7
Min RPKM: 0.8
Std RPKM: 1.4
Median RPKM: 3.2
GTEX-QDVN-1326-SM-48TZ3 8.7
GTEX-146FQ-1926-SM-5NQBY 8.3
GTEX-U4B1-1126-SM-4DXV3 7.7
GTEX-PWOO-1326-SM-48TCJ 7.7
GTEX-QMRM-1226-SM-447C6 7.6
GTEX-144GN-1126-SM-5LU33 7.3
GTEX-11TT1-1026-SM-5PNW7 7.1
GTEX-R53T-1326-SM-48FCQ 6.9
Show all