TSC2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:9.6 FPKM
GTEx:19.6 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA030409

 

Antibody CAB002225

 

Endothelial cells

Low   Not detected  

Glandular cells

Low   Medium  

Peripheral nerve/ganglion

Medium   Not detected  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

9.6

overview Male, age 54
Sample 1
FPKM: 10.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 11.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 12.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.1
Samples: 149

Max RPKM: 31.8
Min RPKM: 11
Std RPKM: 3.5
Median RPKM: 20.2
GTEX-XUW1-1826-SM-4BOQD 31.8
GTEX-X15G-1526-SM-4PQZM 30.4
GTEX-XQ8I-2326-SM-4BOQC 28.6
GTEX-13PL7-2426-SM-5J2N3 28.2
GTEX-13OW6-2226-SM-5N9FL 27.2
GTEX-WYVS-1126-SM-4SOJX 25.9
GTEX-145LS-2926-SM-5O99G 25.4
GTEX-13OW8-2726-SM-5L3FZ 25.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 19.1
Samples: 196

Max RPKM: 30.3
Min RPKM: 5.5
Std RPKM: 3
Median RPKM: 19.2
GTEX-13U4I-2426-SM-5LU34 30.3
GTEX-11P81-1126-SM-5GU5G 27.5
GTEX-UJMC-1326-SM-4IHLS 27.1
GTEX-U3ZH-1326-SM-4DXSF 26.1
GTEX-X5EB-0926-SM-46MVT 24.3
GTEX-TML8-1326-SM-4DXTO 23.8
GTEX-XQ8I-2126-SM-4BOOM 23.7
GTEX-PLZ6-0926-SM-3P5ZQ 23.6
Show all