CSK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:22.2 FPKM
GTEx:13.3 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA026488

 

Antibody HPA028425

 

Antibody CAB011203

 

Endothelial cells

Not detected   Not detected   Not detected  

Glandular cells

Low   Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium   Low  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

22.2

overview Male, age 54
Sample 1
FPKM: 22.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 26.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 27.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 16.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 26.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 17.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 18.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

13.3

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.7
Samples: 149

Max RPKM: 15.2
Min RPKM: 3.2
Std RPKM: 2
Median RPKM: 7.7
GTEX-11TT1-0926-SM-5GU5M 15.2
GTEX-146FH-2426-SM-5Q5EW 13.5
GTEX-YJ8A-1726-SM-5P9IQ 12.5
GTEX-WQUQ-2626-SM-4MVNP 12.5
GTEX-147GR-2826-SM-5RQK8 12.4
GTEX-V955-1726-SM-4JBHF 12.1
GTEX-139D8-2926-SM-5IJBM 12.0
GTEX-139TS-2226-SM-5J2N1 11.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 18.9
Samples: 196

Max RPKM: 42.6
Min RPKM: 4
Std RPKM: 8.6
Median RPKM: 20.4
GTEX-1399R-2226-SM-5P9JB 42.6
GTEX-XV7Q-2126-SM-4BRVX 39.8
GTEX-R53T-1326-SM-48FCQ 37.2
GTEX-R55D-1826-SM-48FEF 34.7
GTEX-XMK1-1726-SM-4B64Z 34.3
GTEX-Q2AH-1226-SM-48TZL 34.2
GTEX-WHWD-1226-SM-4OOS1 33.0
GTEX-OXRK-1726-SM-3NB16 32.8
Show all