We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 240.0
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 207.8
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 105.7
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 442.0
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 425.4
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 271.7
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 129.0
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 237.0
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 238.0
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 561.3
Min RPKM: 61.4
Std RPKM: 94.5
Median RPKM: 305
GTEX-T6MN-2026-SM-4DM7L
561.3
GTEX-N7MS-0126-SM-3TW8O
525.9
GTEX-QEG4-0126-SM-48TZE
511.8
GTEX-11WQC-2326-SM-5EQKE
502.0
GTEX-13112-0226-SM-5P9IV
478.7
GTEX-S7PM-0626-SM-4AD4Q
477.1
GTEX-11ZUS-2726-SM-5FQUA
476.0
GTEX-WK11-0326-SM-4OOS6
451.3
GTEX-117YW-1526-SM-5EGGP
448.0
GTEX-12WSL-2326-SM-5DUXQ
442.5
GTEX-OOBK-2126-SM-3LK5T
437.8
GTEX-14ABY-0626-SM-5Q5C9
433.4
GTEX-Y111-2426-SM-4TT23
427.9
GTEX-12WSH-0326-SM-5GCNH
427.7
GTEX-13FHP-2826-SM-5IJFW
425.6
GTEX-11TUW-2226-SM-5EQL9
423.0
GTEX-139TS-1726-SM-5IJG5
413.6
GTEX-TKQ2-1526-SM-4DXUN
413.2
GTEX-Q2AI-1226-SM-48U14
409.6
GTEX-13OW5-2526-SM-5L3I1
407.8
GTEX-13N1W-2626-SM-5IJEP
400.4
GTEX-11DXZ-2126-SM-59881
400.1
GTEX-UPJH-0126-SM-4IHLL
399.6
GTEX-SNOS-1126-SM-4DM67
390.5
GTEX-11NV4-1726-SM-5N9FC
390.5
GTEX-11EQ8-1426-SM-5EGJR
389.8
GTEX-REY6-0126-SM-48FDT
389.6
GTEX-U8T8-1126-SM-4DXUE
388.0
GTEX-WOFM-1126-SM-4OOSB
386.7
GTEX-S95S-1126-SM-4B64E
386.5
GTEX-XAJ8-1326-SM-47JYT
385.3
GTEX-12ZZY-0126-SM-5LZV2
381.3
GTEX-ZVTK-0126-SM-57WDG
378.9
GTEX-11NUK-2626-SM-5A5MB
378.1
GTEX-11EQ9-1926-SM-5PNVV
377.8
GTEX-ZAB5-2426-SM-5CVMW
376.3
GTEX-S4Q7-1226-SM-4AD5I
374.2
GTEX-12696-0226-SM-5EGL3
373.4
GTEX-144GL-0726-SM-5LU4P
368.7
GTEX-WH7G-1926-SM-4LVMM
367.4
GTEX-145MO-0126-SM-5S2QU
366.6
GTEX-OHPM-2126-SM-3LK75
366.5
GTEX-11GS4-2026-SM-5N9CP
366.2
GTEX-13FLW-2126-SM-5N9FD
365.9
GTEX-13NZA-2526-SM-5IJFX
365.5
GTEX-T5JC-0726-SM-4DM55
364.7
GTEX-ZQUD-2026-SM-51MSM
364.4
GTEX-11OF3-1826-SM-5987N
361.9
GTEX-117XS-2026-SM-5GID1
360.7
GTEX-13111-1526-SM-5EGJX
359.9
GTEX-QV31-1126-SM-4R1K4
358.6
GTEX-XLM4-1526-SM-4AT6D
357.7
GTEX-ZTSS-1526-SM-51MTC
357.6
GTEX-144GM-0426-SM-5Q5C8
357.4
GTEX-ZYT6-2726-SM-5GICP
356.4
GTEX-12WSI-2126-SM-5GCMV
348.9
GTEX-YEC3-1726-SM-5IFIK
348.4
GTEX-131XE-0426-SM-5IJF4
348.4
GTEX-13VXU-0726-SM-5J2O7
347.9
GTEX-QEG5-0126-SM-4R1JR
346.5
GTEX-ZA64-1626-SM-5CVME
345.8
GTEX-ZPU1-2126-SM-57WED
343.9
GTEX-13O1R-0726-SM-5IJEI
343.9
GTEX-PW2O-1426-SM-48TCD
343.2
GTEX-RUSQ-2126-SM-47JXK
341.6
GTEX-111FC-1926-SM-5GZYC
337.7
GTEX-XQ3S-2726-SM-4BOP2
336.2
GTEX-Y5V6-1726-SM-4VDSZ
330.6
GTEX-ZVZP-2226-SM-57WBF
327.3
GTEX-TKQ1-0926-SM-4DXU2
324.6
GTEX-Z93S-1726-SM-5HL8G
324.2
GTEX-ZZ64-1126-SM-5GZXY
322.9
GTEX-WZTO-0326-SM-4PQYZ
322.1
GTEX-1339X-1926-SM-5PNVP
317.1
GTEX-ZUA1-2726-SM-59HLJ
315.7
GTEX-13O21-1226-SM-5J2MK
315.4
GTEX-V955-1926-SM-4KL1L
314.7
GTEX-X3Y1-2626-SM-4PQZI
314.3
GTEX-13OVL-0426-SM-5IFG6
313.8
GTEX-13NZB-2026-SM-5MR4M
311.0
GTEX-OXRL-2126-SM-3NM98
310.0
GTEX-R55D-0126-SM-48FEL
308.2
GTEX-1212Z-0326-SM-5FQSJ
307.4
GTEX-WHSB-2126-SM-4M1XF
307.0
GTEX-ZDYS-1326-SM-5IJFF
305.6
GTEX-14753-0626-SM-5Q5CY
305.6
GTEX-X5EB-2026-SM-4E3KA
304.3
GTEX-XBEC-0126-SM-4GIDT
304.3
GTEX-U8XE-0126-SM-4E3I3
304.2
GTEX-111YS-2026-SM-5EGGL
303.0
GTEX-11NSD-1026-SM-5N9BE
302.8
GTEX-V1D1-2126-SM-4JBH4
302.6
GTEX-11P82-1526-SM-5BC5M
294.9
GTEX-XBED-2026-SM-4AT5D
294.8
GTEX-12C56-1426-SM-5FQSW
293.5
GTEX-T8EM-0126-SM-4DM5R
290.8
GTEX-ZV7C-2026-SM-5NQ8F
287.0
GTEX-111CU-1726-SM-5EGHM
286.3
GTEX-Q2AH-1526-SM-48TZG
285.7
GTEX-U4B1-1526-SM-4DXSL
279.6
GTEX-11TT1-2226-SM-5GU6B
277.5
GTEX-S3XE-1526-SM-4AD5A
276.6
GTEX-RWSA-2426-SM-47JXR
274.3
GTEX-XGQ4-2026-SM-4AT6G
273.6
GTEX-11LCK-2326-SM-5HL53
273.0
GTEX-ZT9W-2226-SM-57WFU
271.9
GTEX-11O72-0726-SM-5P9GO
270.1
GTEX-ZT9X-1426-SM-5DUX1
268.0
GTEX-132QS-1226-SM-5P9GD
265.5
GTEX-R55C-1426-SM-48FED
265.0
GTEX-OOBJ-2126-SM-3NB1N
263.2
GTEX-13N2G-0126-SM-5N9DV
262.3
GTEX-S7SE-0326-SM-4AT5Q
262.2
GTEX-144GN-1626-SM-5Q5BU
261.9
GTEX-139TT-2226-SM-5LZWO
261.0
GTEX-11EI6-2226-SM-5EGJM
259.8
GTEX-QLQW-1026-SM-447A9
257.3
GTEX-111VG-1926-SM-5GIDO
255.0
GTEX-OIZH-2126-SM-3NB1P
251.0
GTEX-SNMC-1026-SM-4DM7K
248.9
GTEX-XPT6-1626-SM-4B655
246.9
GTEX-147JS-0126-SM-5S2TW
246.7
GTEX-13O61-2026-SM-5J2M6
246.4
GTEX-SUCS-1326-SM-4DM5T
245.9
GTEX-1399Q-2826-SM-5IJEZ
244.4
GTEX-P4QS-2126-SM-3NMCF
244.2
GTEX-QV44-1726-SM-4R1KG
244.0
GTEX-13FTW-1326-SM-5LZZD
243.8
GTEX-U3ZM-1626-SM-4DXSK
241.7
GTEX-XMK1-2026-SM-4B65K
240.0
GTEX-139T6-1226-SM-5IFFC
237.2
GTEX-NFK9-0126-SM-3LK5H
228.8
GTEX-OIZI-0126-SM-3NB13
224.7
GTEX-X261-2326-SM-4PQYU
222.0
GTEX-YF7O-2026-SM-4W1YE
221.7
GTEX-145MH-2326-SM-5O9AW
221.1
GTEX-XPVG-2226-SM-4B65U
220.0
GTEX-RM2N-1326-SM-48FCW
219.7
GTEX-YEC4-1526-SM-4W1YU
217.9
GTEX-13NYB-2226-SM-5MR58
217.0
GTEX-Y8E4-2226-SM-5LU94
213.0
GTEX-ZYFC-0126-SM-5GIEH
210.6
GTEX-WVLH-2626-SM-4MVNV
209.6
GTEX-QMRM-1526-SM-4R1K6
208.8
GTEX-11WQK-2826-SM-5EQKH
206.4
GTEX-P4QR-0226-SM-3NMCH
205.5
GTEX-13OVH-0726-SM-5N9BU
199.8
GTEX-1399R-1626-SM-5P9GG
195.0
GTEX-Y9LG-1726-SM-4VBQE
193.2
GTEX-WFG8-1926-SM-4LVM1
188.8
GTEX-YB5E-1926-SM-5IFIG
181.3
GTEX-YFCO-1726-SM-4W21S
176.3
GTEX-R55E-0726-SM-48FCZ
173.8
GTEX-11P7K-1026-SM-5HL6Y
169.1
GTEX-YJ89-0626-SM-4TT3Z
166.2
GTEX-145LT-0426-SM-5LUAP
161.8
GTEX-VJYA-1426-SM-4KL1Y
153.7
GTEX-WFON-2026-SM-4LVMW
152.7
GTEX-QLQ7-1426-SM-4R1JX
151.8
GTEX-147F4-0626-SM-5LUAK
144.2
GTEX-ZTX8-1126-SM-51MRM
140.9
GTEX-U3ZH-1526-SM-4DXV1
140.8
GTEX-RN64-2326-SM-48FDW
136.7
GTEX-12WSM-1326-SM-5GCP9
135.3
GTEX-11ONC-2226-SM-5HL6D
135.2
GTEX-ZAB4-0126-SM-5CVMG
134.7
GTEX-PLZ5-1526-SM-3P5ZX
133.7
GTEX-13OW6-0126-SM-5IJGM
118.3
GTEX-S33H-0126-SM-4AD62
114.5
GTEX-O5YT-2126-SM-3MJGD
102.4
GTEX-14A6H-2326-SM-5Q5B5
92.7
GTEX-ZDTT-2026-SM-5K7TY
61.4
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.