HOXA5

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:5.6 FPKM
GTEx:12.8 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA029319

 

Antibody CAB032627

 

Endothelial cells

Not detected   Medium  

Glandular cells

High   Medium  

Peripheral nerve/ganglion

Not detected   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

5.6

overview Male, age 54
Sample 1
FPKM: 2.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 4.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 8.0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 6.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 6.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 8.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

12.8

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 10.2
Samples: 149

Max RPKM: 23
Min RPKM: 2.2
Std RPKM: 4.4
Median RPKM: 9.2
GTEX-117XS-2226-SM-5GIE1 23.0
GTEX-12ZZW-2426-SM-5DUWE 22.9
GTEX-ZAJG-2626-SM-5S2NU 22.8
GTEX-ZE7O-2626-SM-51MSS 21.1
GTEX-14A5I-2426-SM-5Q5CP 20.6
GTEX-12WSM-1426-SM-5GCPA 20.0
GTEX-145MO-2626-SM-5QGPD 19.6
GTEX-12ZZY-2726-SM-5EQ45 19.4
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 15.3
Samples: 196

Max RPKM: 31.3
Min RPKM: 4.4
Std RPKM: 5.7
Median RPKM: 15.1
GTEX-XQ8I-2126-SM-4BOOM 31.3
GTEX-U3ZM-1126-SM-4DXUB 30.3
GTEX-X5EB-0926-SM-46MVT 29.4
GTEX-13O21-2426-SM-5MR4A 28.9
GTEX-XV7Q-2126-SM-4BRVX 28.7
GTEX-S4P3-1226-SM-4AD4Y 27.7
GTEX-ZLV1-1226-SM-4WWBX 27.5
GTEX-133LE-1526-SM-5IFEN 27.3
Show all