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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
1259.8
nTPM
HPA Brain:
462.1
nTPM
GTEx:
1259.8
nTPM
FANTOM5:
504.0
Scaled Tags Per Million
Pig:
156.3
nTPM
Mouse:
128.3
nTPM
Allen mouse:
10.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
462.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 426.8
2586
Male, age 75, left hemisphere
550.3
2666
Male, age 74, left hemisphere
505.7
1870
Female, age 42, unknown
483.9
2411
Female, age 72, unknown
424.9
1830
Male, age 51, unknown
424.8
1833
Male, age 53, unknown
409.2
2828
Female, age 72, unknown
405.0
1827
Male, age 72, unknown
366.0
2219
Male, age 76, both hemispheres
363.0
2019
Male, age 18, unknown
335.1
Dorsal raphe nucleus nTPM: 408.1
2750
Male, age 76, both hemispheres
448.5
2047
Male, age 72, unknown
424.6
2016
Female, age 72, unknown
399.1
1828
Male, age 53, unknown
398.3
2298
Female, age 72, unknown
369.9
Inferior colliculus nTPM: 402.1
2849
Male, age 72, unknown
454.1
1848
Female, age 42, unknown
413.3
1890
Male, age 53, unknown
412.7
2097
Female, age 72, unknown
328.2
Median raphe nucleus nTPM: 455.4
2220
Male, age 76, midline
455.4
Periaquaductal grey, anterior nTPM: 455.4
2502
Female, age 75, unknown
511.5
1947
Male, age 18, unknown
441.4
1795
Male, age 51, unknown
413.1
Periaquaductal grey, dorsal nTPM: 390.4
2850
Male, age 76, both hemispheres
429.9
1840
Male, age 53, unknown
410.0
1831
Male, age 72, unknown
363.9
2464
Female, age 72, unknown
357.8
Periaquaductal grey, lateral nTPM: 385.7
2053
Male, age 18, unknown
434.5
2272
Male, age 74, both hemispheres
362.6
2140
Male, age 76, both hemispheres
360.1
Pretectal area nTPM: 357.2
2825
Male, age 18, unknown
402.4
2407
Male, age 75, both hemispheres
397.9
2007
Male, age 72, unknown
389.6
1817
Female, age 42, unknown
387.5
2224
Female, age 72, unknown
369.0
1815
Male, age 53, unknown
367.6
2316
Male, age 76, right hemisphere
352.6
1944
Female, age 72, unknown
334.4
1816
Male, age 51, unknown
321.0
2667
Female, age 75, unknown
310.5
2273
Male, age 74, both hemispheres
296.3
Red nucleus nTPM: 450.2
2503
Female, age 72, unknown
561.4
2584
Male, age 75, left hemisphere
496.5
1865
Male, age 51, unknown
488.2
2769
Male, age 72, unknown
472.6
2227
Male, age 72, unknown
471.2
1904
Male, age 53, unknown
468.8
2725
Female, age 75, unknown
443.6
1821
Female, age 72, unknown
435.2
2588
Male, age 74, left hemisphere
411.2
2785
Male, age 18, unknown
409.9
1954
Female, age 42, unknown
397.9
2823
Male, age 76, right hemisphere
345.3
Substantia nigra nTPM: 462.1
2699
Male, age 18, unknown
627.1
1851
Male, age 51, unknown
557.4
2665
Male, age 74, both hemispheres
509.8
1916
Female, age 42, unknown
495.7
2590
Female, age 75, unknown
452.0
2409
Female, age 72, unknown
448.1
2583
Male, age 75, right hemisphere
423.2
1889
Female, age 72, unknown
404.0
1941
Male, age 53, unknown
389.2
2241
Male, age 72, unknown
314.6
Superior colliculus nTPM: 413.9
1995
Male, age 72, unknown
501.8
1913
Female, age 42, unknown
484.3
2587
Male, age 74, left hemisphere
472.3
1796
Male, age 53, unknown
453.6
2664
Male, age 75, both hemispheres
437.8
2668
Female, age 75, unknown
419.5
1839
Male, age 51, unknown
396.9
1895
Male, age 76, right hemisphere
344.4
2261
Male, age 18, unknown
325.9
2087
Female, age 72, unknown
302.2
Ventral tegmental area nTPM: 459.5
2223
Female, age 72, unknown
525.2
2410
Female, age 72, unknown
493.2
1915
Female, age 42, unknown
456.7
2021
Male, age 53, unknown
429.7
2218
Male, age 76, both hemispheres
428.0
1942
Male, age 51, unknown
424.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
1259.8
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 1259.8
Samples: 139
Max nTPM: 4411.9
Min nTPM: 393.9
Std nTPM: 552.7
Median nTPM: 1183.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
4411.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
3094.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
2988.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
2953.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
2377.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
2264.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
2249.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
2143.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
2130.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
2097.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
2080.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
2073.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1934.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1884.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
1878.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
1872.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
1854.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
1757.0
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
1740.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
1703.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
1701.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
1683.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1682.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
1667.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
1609.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1573.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
1551.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
1535.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1522.2
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
1521.1
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
1518.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
1503.8
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
1489.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
1479.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
1470.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
1426.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
1421.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1417.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
1414.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
1394.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
1392.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
1385.6
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
1367.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
1358.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1350.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
1345.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
1340.9
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
1338.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
1331.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
1328.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
1317.6
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1312.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
1305.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
1302.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
1301.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
1298.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
1293.1
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
1279.8
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
1269.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1266.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
1254.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
1253.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
1249.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
1238.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
1229.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
1215.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
1207.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
1206.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
1194.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
1183.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
1181.0
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
1173.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
1158.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
1143.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
1141.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
1133.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1119.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1077.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
1060.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1045.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
1037.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
1022.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
1016.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
1010.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
1002.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
994.2
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
991.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
987.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
984.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
981.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
978.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
964.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
950.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
929.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
921.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
918.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
918.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
909.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
905.5
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
897.4
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
893.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
893.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
893.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
888.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
884.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
869.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
865.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
864.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
858.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
856.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
846.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
826.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
820.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
816.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
815.4
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
808.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
804.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
797.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
794.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
781.7
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
780.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
760.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
758.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
756.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
753.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
752.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
739.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
732.4
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
731.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
717.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
715.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
714.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
708.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
684.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
630.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
543.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
530.0
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
475.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
393.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
128.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 128.3
Samples: 4
Max nTPM: 147.7
Min nTPM: 116.2
Sample A
Male
147.7
Sample B
Male
116.3
Sample C
Female
116.2
Sample D
Female
133.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.