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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
290.6
nTPM
Monaco:
236.2
nTPM
Schmiedel:
446.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
290.6
HPA sample
nTPM
gdT-cell nTPM: 217.7
Samples: 6
Max nTPM: 318.3
Min nTPM: 158.2
P10809_1007
158.2
P10809_1022
248.1
P10809_1041
318.3
P10809_1060
170.0
P10809_1077
185.9
P10809_1098
225.5
MAIT T-cell nTPM: 284.1
Samples: 6
Max nTPM: 349.3
Min nTPM: 199.9
P10809_1006
199.9
P10809_1024
349.3
P10809_1043
265.8
P10809_1062
263.1
P10809_1083
287.5
P10809_1097
338.7
Memory CD4 T-cell nTPM: 239.8
Samples: 6
Max nTPM: 279.2
Min nTPM: 194.7
P10809_1014
220.6
P10809_1026
261.8
P10809_1045
268.8
P10809_1064
194.7
P10809_1086
213.4
P10809_1113
279.2
Memory CD8 T-cell nTPM: 215.5
Samples: 5
Max nTPM: 251.6
Min nTPM: 179.6
P10809_1012
179.6
P10809_1027
215.8
P10809_1046
240.4
P10809_1065
190.1
P10809_1111
251.6
Naive CD4 T-cell nTPM: 290.6
Samples: 6
Max nTPM: 342.3
Min nTPM: 249.4
P10809_1015
249.4
P10809_1030
295.1
P10809_1049
342.3
P10809_1068
288.7
P10809_1085
252.9
P10809_1112
315.2
Naive CD8 T-cell nTPM: 246.5
Samples: 6
Max nTPM: 269.6
Min nTPM: 193.7
P10809_1016
267.8
P10809_1031
261.6
P10809_1050
238.2
P10809_1069
247.9
P10809_1087
193.7
P10809_1110
269.6
T-reg nTPM: 204.2
Samples: 6
Max nTPM: 232.8
Min nTPM: 151.4
P10809_1018
151.4
P10809_1037
221.0
P10809_1056
208.8
P10809_1075
191.6
P10809_1094
219.5
P10809_1106
232.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
236.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 176.4
Samples: 4
Max nTPM: 235.4
Min nTPM: 121.1
RHH5202_R3573
192.2
RHH5230_R3602
156.8
RHH5259_R3631
121.1
RHH5288_R3660
235.4
Effector memory CD8 T-cell nTPM: 162.3
Samples: 4
Max nTPM: 210.1
Min nTPM: 85.5
RHH5203_R3574
210.1
RHH5231_R3603
201.8
RHH5260_R3632
85.5
RHH5289_R3661
151.8
MAIT T-cell nTPM: 214.6
Samples: 4
Max nTPM: 247.5
Min nTPM: 152.9
RHH5233_R3605
246.9
RHH5205_R3576
152.9
RHH5262_R3634
210.9
RHH5297_R3663
247.5
Memory CD4 T-cell TFH nTPM: 170.9
Samples: 4
Max nTPM: 266.3
Min nTPM: 29.8
RHH5300_R3666
211.2
RHH5236_R3608
266.3
RHH5265_R3637
176.3
RHH5208_R3579
29.8
Memory CD4 T-cell Th1 nTPM: 198.0
Samples: 4
Max nTPM: 266.4
Min nTPM: 130.5
RHH5210_R3581
257.0
RHH5302_R3668
266.4
RHH5238_R3610
137.9
RHH5267_R3639
130.5
Memory CD4 T-cell Th1/Th17 nTPM: 178.0
Samples: 4
Max nTPM: 303.7
Min nTPM: 110.4
RHH5303_R3669
149.2
RHH5211_R3582
303.7
RHH5239_R3611
110.4
RHH5268_R3640
148.8
Memory CD4 T-cell Th17 nTPM: 158.2
Samples: 4
Max nTPM: 228.6
Min nTPM: 116.3
RHH5304_R3670
171.2
RHH5212_R3583
228.6
RHH5240_R3612
116.3
RHH5269_R3641
116.6
Memory CD4 T-cell Th2 nTPM: 217.9
Samples: 4
Max nTPM: 246.7
Min nTPM: 157.2
RHH5305_R3671
231.7
RHH5213_R3584
236.0
RHH5241_R3613
246.7
RHH5270_R3642
157.2
Naive CD4 T-cell nTPM: 236.2
Samples: 4
Max nTPM: 326.8
Min nTPM: 174.4
RHH5306_R3672
250.7
RHH5214_R3585
326.8
RHH5242_R3614
193.0
RHH5271_R3643
174.4
Naive CD8 T-cell nTPM: 159.2
Samples: 4
Max nTPM: 302.8
Min nTPM: 3.4
RHH5201_R3572
3.4
RHH5229_R3601
114.5
RHH5258_R3630
302.8
RHH5287_R3659
216.0
Non-Vd2 gdTCR nTPM: 154.2
Samples: 4
Max nTPM: 201.1
Min nTPM: 89.8
RHH5235_R3607
89.8
RHH5264_R3636
201.1
RHH5207_R3578
148.3
RHH5299_R3665
177.4
T-reg nTPM: 216.2
Samples: 4
Max nTPM: 283.0
Min nTPM: 142.1
RHH5301_R3667
237.3
RHH5237_R3609
283.0
RHH5266_R3638
142.1
RHH5209_R3580
202.4
Terminal effector memory CD4 T-cell nTPM: 120.3
Samples: 2
Max nTPM: 173.2
Min nTPM: 67.4
RHH5243_R3615
67.4
RHH5272_R3644
173.2
Terminal effector memory CD8 T-cell nTPM: 176.2
Samples: 4
Max nTPM: 235.4
Min nTPM: 95.0
RHH5232_R3604
166.2
RHH5204_R3575
235.4
RHH5261_R3633
95.0
RHH5296_R3662
208.2
Vd2 gdTCR nTPM: 197.4
Samples: 4
Max nTPM: 248.9
Min nTPM: 113.5
RHH5234_R3606
194.8
RHH5206_R3577
248.9
RHH5263_R3635
113.5
RHH5298_R3664
232.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.