PTPN6

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:16.8 FPKM
GTEx:8.5 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not available

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA001466

 

Antibody CAB004572

 

Antibody CAB072845

 

Endothelial cells

Not detected   Not detected   Not detected  

Glandular cells

Medium   Not detected   Not detected  

Peripheral nerve/ganglion

Not available   Not available   Not available  
     
     
     

COLON - HPA RNA-seq

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Average FPKM

16.8

overview Male, age 54
Sample 1
FPKM: 13.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 21.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 16.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 9.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 29.2
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 10.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 17.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

8.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.2
Samples: 149

Max RPKM: 10.7
Min RPKM: 0.7
Std RPKM: 1.6
Median RPKM: 2.7
GTEX-WQUQ-2626-SM-4MVNP 10.7
GTEX-13X6K-2726-SM-5O9DG 10.5
GTEX-YEC3-2026-SM-4WWFL 7.7
GTEX-Y5LM-1426-SM-5RQJL 7.2
GTEX-11ONC-1926-SM-5GU75 6.9
GTEX-11EQ9-1526-SM-5PNY7 6.7
GTEX-11TT1-0926-SM-5GU5M 6.7
GTEX-V955-1726-SM-4JBHF 6.5
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 13.9
Samples: 196

Max RPKM: 36.2
Min RPKM: 0.8
Std RPKM: 7.6
Median RPKM: 15.1
GTEX-UPIC-1726-SM-4IHKG 36.2
GTEX-R53T-1326-SM-48FCQ 32.4
GTEX-Q2AH-1226-SM-48TZL 31.7
GTEX-WHWD-1226-SM-4OOS1 31.5
GTEX-12C56-0626-SM-5EGGC 31.2
GTEX-XMK1-1726-SM-4B64Z 30.2
GTEX-WFG7-1526-SM-4LVMG 26.4
GTEX-147F3-1926-SM-5SIB9 25.4
Show all