CISH

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:6.4 FPKM
GTEx:7.1 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA040812

 

Antibody CAB034039

 

Endothelial cells

High   Medium  

Glandular cells

High   High  

Peripheral nerve/ganglion

High   Low  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

6.4

overview Male, age 54
Sample 1
FPKM: 6.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 6.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 6.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 4.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 7.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 8.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 6.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

7.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.9
Samples: 149

Max RPKM: 28.2
Min RPKM: 1
Std RPKM: 4.3
Median RPKM: 3.4
GTEX-11WQK-2526-SM-5CVL8 28.2
GTEX-ZA64-1426-SM-5CVMC 26.2
GTEX-ZAJG-2626-SM-5S2NU 16.5
GTEX-14BMU-1326-SM-5RQIH 16.4
GTEX-11EM3-1626-SM-5N9CO 16.4
GTEX-ZTSS-1226-SM-51MSZ 14.6
GTEX-ZAB4-2426-SM-5HL8A 14.3
GTEX-14A5H-1626-SM-5SIAN 14.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.3
Samples: 196

Max RPKM: 36.9
Min RPKM: 1.6
Std RPKM: 5
Median RPKM: 9.2
GTEX-13W3W-2126-SM-5K7UX 36.9
GTEX-Y114-1526-SM-4TT79 28.7
GTEX-11WQK-2126-SM-5EQME 27.4
GTEX-13O61-1626-SM-5KM3T 24.5
GTEX-12WSJ-1526-SM-5GCNI 24.2
GTEX-11EQ9-1426-SM-5987G 23.1
GTEX-XV7Q-2126-SM-4BRVX 22.3
GTEX-117YW-1826-SM-5PNY5 19.6
Show all