HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:29.9 nTPM
HPA Brain:66.0 nTPM
GTEx:29.9 nTPM
FANTOM5:52.1 Scaled Tags Per Million
Pig:23.3 nTPM
Mouse:25.5 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052295
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.0
Sample id Sample description nTPM
Hippocampus
nTPM: 51.1
2148 Female, age 91, left hemisphere 57.3
2621 Female, age 67, right hemisphere 57.2
2529 Female, age 94, left hemisphere 53.9
1898 Male, age 80, left hemisphere 47.3
1855 Male, age 76, left hemisphere 46.2
1911 Female, age 85, right hemisphere 44.9
Dentate gyrus
nTPM: 53.8
2531 Female, age 67, both hemispheres 74.0
1927 Female, age 91, both hemispheres 57.8
2246 Female, age 85, both hemispheres 50.2
2528 Male, age 74, both hemispheres 50.0
2010 Male, age 76, both hemispheres 45.7
2530 Female, age 94, left hemisphere 45.2
Entorhinal gyrus
nTPM: 55.5
2613 Female, age 94, left hemisphere 66.8
2686 Male, age 75, right hemisphere 58.7
2764 Male, age 80, right hemisphere 58.3
1787 Male, age 76, left hemisphere 52.0
1938 Female, age 85, left hemisphere 49.7
2117 Female, age 91, right hemisphere 47.6
Hippocampus, CA1
nTPM: 54.9
2749 Male, age 80, left hemisphere 67.4
2082 Female, age 91, right hemisphere 55.7
2045 Male, age 76, both hemispheres 54.1
1873 Female, age 85, both hemispheres 49.7
2527 Male, age 74, both hemispheres 47.4
Hippocampus, CA2
nTPM: 52.8
1963 Male, age 80, left hemisphere 58.4
1892 Male, age 76, both hemispheres 56.8
2249 Male, age 74, both hemispheres 53.3
2437 Female, age 94, left hemisphere 50.6
2113 Female, age 91, right hemisphere 49.8
1940 Female, age 85, left hemisphere 47.7
Hippocampus, CA3
nTPM: 66.0
2436 Male, age 74, both hemispheres 99.2
2620 Female, age 94, left hemisphere 67.8
2861 Female, age 67, both hemispheres 64.9
2137 Male, age 80, left hemisphere 63.5
1867 Male, age 76, both hemispheres 53.1
1891 Female, age 85, both hemispheres 47.3
Parahippocampal cortex
nTPM: 55.8
2622 Female, age 67, right hemisphere 65.3
2693 Female, age 94, both hemispheres 64.7
2532 Female, age 72, left hemisphere 57.7
1850 Male, age 80, both hemispheres 56.4
2250 Female, age 67, right hemisphere 55.6
1933 Female, age 85, both hemispheres 54.3
1990 Female, age 91, right hemisphere 53.7
2245 Female, age 91, both hemispheres 53.6
2018 Male, age 76, both hemispheres 51.5
2692 Male, age 74, both hemispheres 45.1
Perirhinal gyrus
nTPM: 58.6
2848 Male, age 76, right hemisphere 62.5
2521 Female, age 94, right hemisphere 60.4
1841 Female, age 85, right hemisphere 59.6
1847 Female, age 91, left hemisphere 56.2
1794 Male, age 80, right hemisphere 54.4
Subiculum
nTPM: 47.0
2729 Female, age 91, right hemisphere 52.2
1901 Male, age 80, both hemispheres 50.1
1977 Female, age 85, both hemispheres 48.7
2438 Female, age 94, left hemisphere 47.5
2619 Male, age 74, both hemispheres 44.4
2042 Male, age 76, both hemispheres 39.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.9
Samples: 197

Max nTPM: 60.8
Min nTPM: 7.1
Std nTPM: 8.7
Median nTPM: 30.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 60.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 60.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 58.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 52.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 52.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 50.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 45.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 45.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 44.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 44.7
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 43.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.1
FF:10153-102I9 76 years, female 57.5
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.1
Samples: 4

Max nTPM: 19.5
Min nTPM: 17.1
Sample A Female 17.1
Sample B Female 17.4
Sample C Male 19.5
Sample D Male 18.4
Dorsal hippocampus
nTPM: 15.7
Samples: 4

Max nTPM: 19.4
Min nTPM: 12.9
Sample A Female 12.9
Sample B Female 15.9
Sample C Male 14.7
Sample D Male 19.4
Entorhinal cortex
nTPM: 23.3
Samples: 4

Max nTPM: 26.7
Min nTPM: 20.5
Sample A Female 22.6
Sample B Female 23.5
Sample C Male 20.5
Sample D Male 26.7
Ventral hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 19.6
Min nTPM: 15.9
Sample A Female 15.9
Sample B Female 16.9
Sample C Male 19.6
Sample D Male 17.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.5
Samples: 4

Max nTPM: 29.7
Min nTPM: 23.3
Sample A Male 24.1
Sample B Male 29.7
Sample C Female 23.3
Sample D Female 24.8
Hippocampal formation
nTPM: 25.3
Samples: 4

Max nTPM: 27.7
Min nTPM: 23.6
Sample A Male 25.7
Sample B Male 27.7
Sample C Female 23.6
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
69236628 Antisense, RP_050329_04_A11, Mouse strain C57BL/6J (56 days, male) 2.6
70795454 Antisense, RP_050712_01_F03, Mouse strain C57BL/6J (56 days, male) 0.7

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