DGUOK

SOFT TISSUE - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:8.2 FPKM
GTEx:19.1 RPKM

SOFT TISSUE 1 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA034766

 

Antibody HPA057246

 

Adipocytes

Low   Low  

Chondrocytes

Not detected   Medium  

Fibroblasts

Low   Low  

Peripheral nerve

Low   Not available  
   
   
   

SOFT TISSUE 2 - Immunohistochemistry

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Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not available
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA034766

 

Antibody HPA057246

 

Adipocytes

Low   Low  

Chondrocytes

Not available   Not available  

Fibroblasts

Low   Low  

Peripheral nerve

Not available   Low  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

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Average FPKM

8.2

N/A Female, age 80
Sample 1
FPKM: 8.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
FPKM: 6.8
N/A Female, age 57
Sample 3
FPKM: 6.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
FPKM: 11.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
FPKM: 8.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

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Average RPKM

19.1

GTEx sample id

RPKM

 

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 19.3
Samples: 350

Max RPKM: 31.7
Min RPKM: 12.3
Std RPKM: 3.2
Median RPKM: 19
GTEX-Y5V6-2526-SM-5IFJV 31.7
GTEX-13FHP-0226-SM-5K7WD 31.0
GTEX-13RTJ-2526-SM-5S2Q3 30.9
GTEX-ZYFD-0226-SM-5NQ86 30.7
GTEX-11EMC-2826-SM-5PNY6 29.9
GTEX-13OVL-0326-SM-5IJCS 28.7
GTEX-147GR-0426-SM-5S2OL 28.7
GTEX-1399U-2426-SM-5K7XB 28.5
Show all
 

Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 18.9
Samples: 227

Max RPKM: 40.8
Min RPKM: 10.8
Std RPKM: 3.8
Median RPKM: 18.2
GTEX-13X6H-1726-SM-5Q5EH 40.8
GTEX-1399S-1426-SM-5PNYQ 31.7
GTEX-11WQK-1526-SM-5EGKN 28.8
GTEX-132QS-0826-SM-5K7WV 28.8
GTEX-1212Z-0526-SM-5FQSQ 28.7
GTEX-145MI-0826-SM-5SI95 28.5
GTEX-13IVO-2426-SM-5K7V9 28.5
GTEX-ZYVF-1026-SM-5E44V 27.7
Show all