DARS

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:39.8 FPKM
GTEx:21.6 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Medium
Langerhans:Medium
Melanocytes:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020451

 

Antibody HPA029804

 

Antibody HPA029805

 

Fibroblasts

Low   Medium   Not detected  

Keratinocytes

High   Medium   Low  

Langerhans

Medium   Medium   Low  

Melanocytes

Medium   Medium   Not detected  
     
     
     

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA020451

 

Antibody HPA029804

 

Antibody HPA029805

 

Epidermal cells

High   Medium   Medium  
        
        
        
     
     
     

SKIN - HPA RNA-seq

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Average FPKM

39.8

overview Female, age 34
Sample 1
FPKM: 46.4
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 49.2
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 23.9

SKIN - GTEx RNA-seq

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Average RPKM

21.6

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 21.9
Samples: 250

Max RPKM: 37.3
Min RPKM: 7.6
Std RPKM: 5.2
Median RPKM: 21.6
GTEX-14C38-0726-SM-5SI6M 37.3
GTEX-145MI-0626-SM-5SI8S 36.1
GTEX-12WSB-2926-SM-59HKL 35.1
GTEX-144GL-0626-SM-5LU4D 34.8
GTEX-13OVH-0526-SM-5L3E6 34.8
GTEX-13X6K-0626-SM-5LU5D 34.3
GTEX-148VJ-0626-SM-5LUAW 34.1
GTEX-13X6J-0626-SM-5LU5F 33.5
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 21.2
Samples: 357

Max RPKM: 43.1
Min RPKM: 10
Std RPKM: 5.3
Median RPKM: 20.8
GTEX-131XE-2326-SM-5PNZ2 43.1
GTEX-13NYC-0326-SM-5K7WP 39.0
GTEX-S32W-2126-SM-2XCB1 37.9
GTEX-13IVO-0126-SM-5J1NG 35.9
GTEX-X4XY-0226-SM-4E3IZ 35.7
GTEX-13OVH-0126-SM-5MR4B 34.2
GTEX-SN8G-0126-SM-32PLI 34.1
GTEX-P44H-0226-SM-2XCEU 34.0
Show all