SPR

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:29.3 FPKM
GTEx:24.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA039505

 

Endothelial cells

Medium  

Glandular cells

High  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

29.3

overview Male, age 54
Sample 1
FPKM: 27.0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 32.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 27.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 35.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 24.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 26.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 31.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

24.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 18.9
Samples: 149

Max RPKM: 121.5
Min RPKM: 4.6
Std RPKM: 12.1
Median RPKM: 16.2
GTEX-132AR-2826-SM-5IJFV 121.5
GTEX-ZAJG-2626-SM-5S2NU 56.3
GTEX-131XE-1026-SM-5EGKE 54.8
GTEX-ZF28-2526-SM-57WFH 52.5
GTEX-146FH-2426-SM-5Q5EW 47.7
GTEX-ZAB5-1426-SM-5HL9D 36.9
GTEX-XV7Q-2226-SM-4BRVY 36.4
GTEX-1399R-2126-SM-5K7WZ 36.1
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 29.1
Samples: 196

Max RPKM: 97.7
Min RPKM: 2.5
Std RPKM: 14.6
Median RPKM: 28.6
GTEX-132AR-2726-SM-5PNVN 97.7
GTEX-13S86-1626-SM-5Q5C5 79.4
GTEX-1399R-2226-SM-5P9JB 79.4
GTEX-Q734-1126-SM-48TZY 77.5
GTEX-131XE-0826-SM-5HL9W 61.5
GTEX-UJHI-1126-SM-4IHLN 61.4
GTEX-139YR-2126-SM-5KM11 61.0
GTEX-XV7Q-2126-SM-4BRVX 56.2
Show all