ARHGAP40

GENERAL INFORMATION

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Gene name

ARHGAP40

Gene description

Rho GTPase activating protein 40

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Group enriched (esophagus, skin)
GTEx:Tissue enhanced (breast, esophagus, skin)

Protein evidence

Evidence at protein level

Protein localization

RNA data suggests high expression in squamous epithelia. RNA-based expert annotation gave inconclusive results.

ANTIBODY RELIABILITY

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Data reliability
description

Pending external verification.

Data reliability

Uncertain based on 2 antibodies.
HPA042636 , HPA042840
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Kidney & urinary bladder
N/A
Male tissues
N/A
Testis
N/A
Epididymis
N/A
N/A
Prostate
N/A
Seminal vesicle
N/A
N/A
Female tissues
N/A
Breast
N/A
N/A
Vagina
N/A
N/A
Cervix, uterine
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.


RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Group enriched (esophagus, skin)

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enhanced (breast, esophagus, skin)

Organ

Expression



GENE INFORMATION

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Gene name

ARHGAP40 (HGNC Symbol)

Synonyms

C20orf95, dJ1100H13.4

Description

Rho GTPase activating protein 40 (HGNC Symbol)

Entrez gene summary

Chromosome

20

Cytoband

q11.23

Chromosome location (bp)

38601934 - 38651035

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000124143 (version 78.38)

Entrez gene

343578

UniProt

Q5TG30 (UniProt - Evidence at transcript level)

neXtProt

NX_Q5TG30

Antibodypedia

ARHGAP40 antibodies


PROTEIN BROWSER

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ENST00000243967
 
ENST00000373345
 
ENST00000373346
 
ENST00000414158
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ARHGAP40-001 ENSP00000243967
ENST00000243967
Show » Show » 592 65 No 0
ARHGAP40-003 ENSP00000362443
ENST00000373346
Show » 154 17.2 No 0
ARHGAP40-004 ENSP00000414822
ENST00000414158
Show » 72 7.8 No 0
ARHGAP40-201 ENSP00000362442
ENST00000373345
Q5TG30
Show all »
Show » Show » 622 68.9 No 0