PODXL

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:2.1 FPKM
GTEx:10.4 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA002110

 

Antibody HPA045507

 

Antibody CAB016169

 

Antibody CAB062558

 

Antibody CAB068219

 

Antibody CAB068220

 

Endothelial cells

High   Not detected   Medium   Not detected   Medium   High  

Glandular cells

Low   Low   Not detected   Not detected   Not detected   Not detected  

Peripheral nerve/ganglion

Medium   Not available   Not detected   Not detected   Not available   Not available  
           
           
           

COLON - HPA RNA-seq

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Average FPKM

2.1

overview Male, age 54
Sample 1
FPKM: 2.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 2.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 1.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 2.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 1.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 2.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 2.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

10.4

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.1
Samples: 149

Max RPKM: 31.2
Min RPKM: 2.2
Std RPKM: 5.1
Median RPKM: 10.5
GTEX-13X6I-2726-SM-5Q5ET 31.2
GTEX-WFON-1326-SM-4LVMN 30.0
GTEX-145ME-1126-SM-5SIAT 29.8
GTEX-145LS-2926-SM-5O99G 26.1
GTEX-13X6K-2726-SM-5O9DG 24.4
GTEX-13OW6-2226-SM-5N9FL 22.6
GTEX-11PRG-2026-SM-5GU5F 22.3
GTEX-13OVJ-1826-SM-5KM2D 20.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 9.7
Samples: 196

Max RPKM: 35
Min RPKM: 2.6
Std RPKM: 5.7
Median RPKM: 8
GTEX-13O3O-2526-SM-5L3DR 35.0
GTEX-13OVI-2026-SM-5J1MU 34.0
GTEX-11O72-2226-SM-5PNW2 31.3
GTEX-ZXES-1626-SM-5NQ7L 30.1
GTEX-13OVG-1426-SM-5K7VP 29.3
GTEX-14C38-2626-SM-5RQI4 26.9
GTEX-13FHP-2426-SM-5KLZ5 25.7
GTEX-111VG-2226-SM-5N9DU 23.9
Show all