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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
119.4
nTPM
HPA Brain:
216.6
nTPM
GTEx:
119.4
nTPM
FANTOM5:
126.5
Scaled Tags Per Million
Pig:
223.0
nTPM
Mouse:
157.3
nTPM
Allen mouse:
5.2
Expression energy
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
216.6
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 188.0
2586
Male, age 75, left hemisphere
267.8
1827
Male, age 72, unknown
223.0
2666
Male, age 74, left hemisphere
222.4
1870
Female, age 42, unknown
194.6
2828
Female, age 72, unknown
189.8
2411
Female, age 72, unknown
165.5
2019
Male, age 18, unknown
160.9
1833
Male, age 53, unknown
159.1
2219
Male, age 76, both hemispheres
149.3
1830
Male, age 51, unknown
147.2
Dorsal raphe nucleus nTPM: 188.0
2047
Male, age 72, unknown
216.8
2298
Female, age 72, unknown
210.6
1828
Male, age 53, unknown
182.8
2016
Female, age 72, unknown
167.5
2750
Male, age 76, both hemispheres
162.3
Inferior colliculus nTPM: 187.4
2849
Male, age 72, unknown
193.3
2097
Female, age 72, unknown
191.6
1848
Female, age 42, unknown
187.7
1890
Male, age 53, unknown
177.1
Median raphe nucleus nTPM: 186.9
2220
Male, age 76, midline
186.9
Periaquaductal grey, anterior nTPM: 216.6
1947
Male, age 18, unknown
243.1
1795
Male, age 51, unknown
220.9
2502
Female, age 75, unknown
185.9
Periaquaductal grey, dorsal nTPM: 174.5
1840
Male, age 53, unknown
212.7
1831
Male, age 72, unknown
172.6
2850
Male, age 76, both hemispheres
165.5
2464
Female, age 72, unknown
147.4
Periaquaductal grey, lateral nTPM: 161.4
2053
Male, age 18, unknown
187.6
2140
Male, age 76, both hemispheres
151.6
2272
Male, age 74, both hemispheres
145.1
Pretectal area nTPM: 188.9
2407
Male, age 75, both hemispheres
220.9
2007
Male, age 72, unknown
210.2
1816
Male, age 51, unknown
206.3
1817
Female, age 42, unknown
203.2
2825
Male, age 18, unknown
197.9
2667
Female, age 75, unknown
190.4
2224
Female, age 72, unknown
180.8
1944
Female, age 72, unknown
179.7
1815
Male, age 53, unknown
175.7
2273
Male, age 74, both hemispheres
156.7
2316
Male, age 76, right hemisphere
156.1
Red nucleus nTPM: 159.3
2584
Male, age 75, left hemisphere
205.6
1821
Female, age 72, unknown
186.8
2725
Female, age 75, unknown
177.1
2588
Male, age 74, left hemisphere
171.7
2769
Male, age 72, unknown
156.4
2503
Female, age 72, unknown
152.7
2227
Male, age 72, unknown
146.4
1954
Female, age 42, unknown
146.3
1904
Male, age 53, unknown
146.0
2785
Male, age 18, unknown
144.2
1865
Male, age 51, unknown
142.2
2823
Male, age 76, right hemisphere
136.0
Substantia nigra nTPM: 199.8
1916
Female, age 42, unknown
247.6
1851
Male, age 51, unknown
233.7
2583
Male, age 75, right hemisphere
212.7
1941
Male, age 53, unknown
211.1
2665
Male, age 74, both hemispheres
210.8
1889
Female, age 72, unknown
207.0
2241
Male, age 72, unknown
184.5
2590
Female, age 75, unknown
179.3
2699
Male, age 18, unknown
178.0
2409
Female, age 72, unknown
133.0
Superior colliculus nTPM: 180.3
2664
Male, age 75, both hemispheres
247.7
1796
Male, age 53, unknown
211.7
2668
Female, age 75, unknown
198.8
2587
Male, age 74, left hemisphere
182.0
1839
Male, age 51, unknown
180.3
2261
Male, age 18, unknown
177.4
1895
Male, age 76, right hemisphere
173.6
2087
Female, age 72, unknown
166.3
1913
Female, age 42, unknown
137.0
1995
Male, age 72, unknown
127.8
Ventral tegmental area nTPM: 201.2
1915
Female, age 42, unknown
228.0
2223
Female, age 72, unknown
215.9
1942
Male, age 51, unknown
205.5
2218
Male, age 76, both hemispheres
191.9
2021
Male, age 53, unknown
184.8
2410
Female, age 72, unknown
181.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
119.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 119.4
Samples: 139
Max nTPM: 211.5
Min nTPM: 63.1
Std nTPM: 26.6
Median nTPM: 114.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
211.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
199.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
194.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
188.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
185.2
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
182.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
167.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
165.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
161.3
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
160.7
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
160.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
158.5
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
156.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
154.6
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
154.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
154.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
151.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
150.8
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
150.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
150.2
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
149.6
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
148.3
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
148.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
148.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
145.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
143.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
143.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
138.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
137.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
136.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
135.8
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
135.8
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
135.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
134.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
133.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
131.9
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
131.6
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
131.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
130.4
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
129.9
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
129.9
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
128.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
127.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
126.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
126.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
126.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
125.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
123.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
122.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
122.8
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
122.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
121.6
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
121.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
121.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
120.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
119.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
119.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
119.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
118.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
118.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
117.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
117.0
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
116.8
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
116.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
116.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
116.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
115.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
115.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
114.7
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
114.7
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
114.1
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
113.7
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
113.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
112.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
112.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
112.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
112.5
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
112.5
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
112.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
111.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
110.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
110.5
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
110.3
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
109.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
109.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
108.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
108.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
107.8
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
107.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
107.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
107.3
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
106.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
106.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
106.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
105.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
104.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
104.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
104.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
104.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
103.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
103.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
102.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
102.6
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
102.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
101.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
100.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
100.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
99.4
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
99.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
99.0
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
98.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
97.5
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
97.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
97.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
96.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
96.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
95.6
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
94.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
93.3
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
92.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
91.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
90.6
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
90.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
88.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
87.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
87.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
87.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
86.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
85.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
85.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
85.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
85.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
84.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
84.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
82.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
82.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
79.2
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
75.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
63.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
157.3
Mouse sample
Sample description
nTPM
Midbrain nTPM: 157.3
Samples: 4
Max nTPM: 160.3
Min nTPM: 154.9
Sample A
Male
155.6
Sample B
Male
158.3
Sample C
Female
160.3
Sample D
Female
154.9
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.