RBM17

GENERAL INFORMATION

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Gene name

RBM17

Gene description

RNA binding motif protein 17

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

6
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all

Protein evidence

Evidence at protein level

Protein localization

General nuclear expression.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Supportive based on 2 antibodies.
HPA037477 , HPA037478
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Bone marrow

Lymph node

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Expressed in all

Organ

Expression

GTEx dataset
RNA tissue category:  Expressed in all

Organ

Expression



GENE INFORMATION

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Gene name

RBM17 (HGNC Symbol)

Synonyms

MGC14439, SPF45

Description

RNA binding motif protein 17 (HGNC Symbol)

Entrez gene summary

This gene encodes an RNA binding protein. The encoded protein is part of the spliceosome complex and functions in the second catalytic step of mRNA splicing. Alternatively spliced transcript variants have been described. Related pseudogenes exist on chromosomes 9 and 15. [provided by RefSeq, Mar 2009]

Chromosome

10

Cytoband

p15.1

Chromosome location (bp)

6088987 - 6117457

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000134453 (version 78.38)

Entrez gene

84991

UniProt

Q96I25 (UniProt - Evidence at protein level)

neXtProt

NX_Q96I25

Antibodypedia

RBM17 antibodies


PROTEIN BROWSER

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ENST00000379888
 
ENST00000418631
 
ENST00000432931
 
ENST00000437845
 
ENST00000446108
 
ENST00000447032
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RBM17-003 ENSP00000369218
ENST00000379888
Q96I25
Show all »
Show » Show » 401 45 No 0
RBM17-005 ENSP00000395448
ENST00000437845
Q5W012
Show all »
Show » Show » 240 27.1 No 0
RBM17-006 ENSP00000402303
ENST00000418631
Q5W011
Show all »
Show » Show » 212 24.2 No 0
RBM17-007 ENSP00000408214
ENST00000432931
Q5W010
Show all »
Show » Show » 221 25.3 No 0
RBM17-009 ENSP00000406024
ENST00000447032
Show » Show » 225 25.2 No 0
RBM17-201 ENSP00000388638
ENST00000446108
Q96I25
Show all »
Show » Show » 401 45 No 0