CLOCK

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:4.9 FPKM
GTEx:3.2 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA001867

 

Antibody HPA027565

 

Endothelial cells

Medium   Medium  

Glandular cells

Medium   Medium  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

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Average FPKM

4.9

overview Male, age 54
Sample 1
FPKM: 5.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 5.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 5.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 3.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 5.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 3.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 4.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

3.2

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 3.5
Samples: 149

Max RPKM: 5.2
Min RPKM: 2
Std RPKM: 0.6
Median RPKM: 3.4
GTEX-131XG-1526-SM-5GCNQ 5.2
GTEX-XAJ8-0726-SM-47JY5 4.9
GTEX-14E6E-1726-SM-5S2R6 4.9
GTEX-11I78-1326-SM-5PNY9 4.8
GTEX-139D8-2926-SM-5IJBM 4.8
GTEX-11WQK-2526-SM-5CVL8 4.7
GTEX-13VXT-2026-SM-5L3EW 4.6
GTEX-111YS-1826-SM-5GIEP 4.6
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 2.9
Samples: 196

Max RPKM: 4.6
Min RPKM: 1.3
Std RPKM: 0.7
Median RPKM: 2.8
GTEX-ZV6S-1226-SM-59HLH 4.6
GTEX-111VG-2226-SM-5N9DU 4.6
GTEX-V955-1626-SM-4JBHJ 4.5
GTEX-XXEK-1926-SM-4BRVD 4.4
GTEX-147JS-2526-SM-5S2Q8 4.4
GTEX-12WSL-1626-SM-5GCMU 4.3
GTEX-X5EB-0926-SM-46MVT 4.3
GTEX-U3ZH-1326-SM-4DXSF 4.3
Show all