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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 39.9
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 48.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 33.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 40.3
Min RPKM: 3.8
Std RPKM: 7.1
Median RPKM: 13.3
GTEX-T2IS-1526-SM-32QPR
40.3
GTEX-R3RS-0626-SM-48FE1
39.8
GTEX-X4EP-2926-SM-3P5YQ
38.9
GTEX-VJWN-0726-SM-3GIJ8
34.9
GTEX-XOT4-0726-SM-4GIAW
32.4
GTEX-13O3O-0826-SM-5K7WE
32.1
GTEX-ZVT2-1826-SM-5NQ8W
31.0
GTEX-11P7K-0726-SM-5EGKX
30.6
GTEX-12WSK-2226-SM-5GCO5
28.5
GTEX-WI4N-1426-SM-3LK7H
28.0
GTEX-Y5LM-1726-SM-4VDSX
27.6
GTEX-ZV7C-1826-SM-5NQ83
27.3
GTEX-13113-1726-SM-5GCOO
27.0
GTEX-Y5V5-2126-SM-4WWFO
26.9
GTEX-ZZPU-0626-SM-5E43T
26.8
GTEX-S4P3-1326-SM-4AD6V
26.7
GTEX-WYBS-0926-SM-3NM94
26.1
GTEX-R55F-1726-SM-2TF4R
25.7
GTEX-ZF29-1926-SM-5S2P1
25.6
GTEX-SE5C-2126-SM-4BRUJ
25.2
GTEX-RU72-0626-SM-46MUI
23.5
GTEX-TMMY-0726-SM-33HBE
23.1
GTEX-13PL6-2926-SM-5L3I2
23.0
GTEX-1399U-1826-SM-5PNZ1
22.1
GTEX-ZLV1-1426-SM-4WWES
22.1
GTEX-XMD2-0926-SM-4WWEF
22.0
GTEX-WXYG-2226-SM-4E3IM
22.0
GTEX-UJHI-1426-SM-3DB9C
21.9
GTEX-ZF3C-2326-SM-5S2MZ
21.5
GTEX-11EM3-1326-SM-5N9C6
21.2
GTEX-XYKS-1326-SM-4BRUN
20.7
GTEX-T6MO-0326-SM-32QOK
20.6
GTEX-ZTX8-1226-SM-4YCE9
20.0
GTEX-13FTY-2226-SM-5J1ND
20.0
GTEX-WRHU-0326-SM-3MJFY
20.0
GTEX-13QIC-2326-SM-5LU5N
20.0
GTEX-1269C-2426-SM-5FQSN
19.9
GTEX-Y3IK-2326-SM-4WWDT
19.9
GTEX-Q2AG-0326-SM-48U1O
19.6
GTEX-QDT8-0626-SM-48TYW
19.6
GTEX-ZY6K-1626-SM-5GZWV
19.4
GTEX-ZC5H-2626-SM-5J2MG
18.9
GTEX-ZXES-0826-SM-5E43C
18.9
GTEX-S341-1526-SM-4AD6K
18.8
GTEX-13OW5-2226-SM-5L3HC
18.8
GTEX-14AS3-1626-SM-5S2OY
18.7
GTEX-11EMC-2026-SM-5A5JV
18.5
GTEX-111YS-1926-SM-5GICC
18.1
GTEX-SIU7-1626-SM-4BRUK
18.0
GTEX-145LT-0726-SM-5S2VM
17.9
GTEX-Y114-2026-SM-4TT7L
17.7
GTEX-ZTTD-1026-SM-51MRD
17.5
GTEX-XUW1-2326-SM-4BOO5
17.5
GTEX-1122O-1226-SM-5H113
17.3
GTEX-WYVS-1726-SM-3NMAY
17.3
GTEX-ZAJG-0626-SM-5HL8X
17.1
GTEX-13N11-1726-SM-5J1OJ
17.1
GTEX-T5JC-2126-SM-32PMO
16.9
GTEX-S4UY-0726-SM-4AD6X
16.9
GTEX-WYJK-1326-SM-3NB2T
16.8
GTEX-12ZZX-1126-SM-5EGKB
16.7
GTEX-11WQC-1726-SM-5GU4W
16.7
GTEX-13W3W-1226-SM-5LU4H
16.6
GTEX-RWS6-1926-SM-47JXY
16.6
GTEX-QEG5-0726-SM-4R1JQ
16.6
GTEX-11PRG-0826-SM-5EQ6A
16.5
GTEX-X15G-1626-SM-3NMB3
16.5
GTEX-ZVE2-1226-SM-5NQ8R
16.4
GTEX-ZVT4-1026-SM-57WC4
16.3
GTEX-UPK5-2326-SM-3P5Z8
16.2
GTEX-ZVTK-0326-SM-51MRR
16.2
GTEX-13D11-1026-SM-5IJFB
16.1
GTEX-XUJ4-1926-SM-4BOOV
16.1
GTEX-T6MN-0726-SM-32PML
16.0
GTEX-11EI6-0626-SM-5985T
15.8
GTEX-XUZC-1626-SM-4BRVP
15.8
GTEX-X261-0626-SM-3NMD9
15.7
GTEX-1314G-1226-SM-5BC6D
15.6
GTEX-ZF2S-2026-SM-5E461
15.6
GTEX-TML8-1226-SM-32QON
15.6
GTEX-11P81-1926-SM-5BC53
15.5
GTEX-13NZ8-0126-SM-5IJCT
15.4
GTEX-WOFL-0826-SM-3MJG1
15.3
GTEX-T5JW-2026-SM-4DM63
15.1
GTEX-YFC4-1426-SM-5IFJG
15.0
GTEX-U412-1826-SM-4DXTJ
14.8
GTEX-Y3I4-1526-SM-4TT7K
14.8
GTEX-147F4-2826-SM-5NQBN
14.8
GTEX-11GS4-2126-SM-5A5KR
14.7
GTEX-139T8-0826-SM-5L3DE
14.7
GTEX-U3ZH-1426-SM-4DXSR
14.7
GTEX-QEL4-2126-SM-447AE
14.6
GTEX-Y8LW-1626-SM-5IFHX
14.5
GTEX-ZVZQ-0826-SM-51MRF
14.2
GTEX-145MO-0826-SM-5NQBL
14.2
GTEX-13NZ9-1026-SM-5MR5K
14.1
GTEX-ZU9S-1926-SM-5NQBP
14.1
GTEX-133LE-1726-SM-5K7VQ
13.9
GTEX-11DXW-0626-SM-5N9ER
13.9
GTEX-W5X1-2326-SM-3GIL6
13.9
GTEX-146FH-0826-SM-5SI8T
13.9
GTEX-13FHO-0826-SM-5L3E8
13.6
GTEX-14E6E-1326-SM-5S2NR
13.6
GTEX-TKQ1-0226-SM-33HB5
13.5
GTEX-11TT1-2126-SM-5GU5Y
13.4
GTEX-131XW-0726-SM-5EGK3
13.3
GTEX-1211K-1926-SM-5EQLB
13.3
GTEX-1313W-0826-SM-5EQ4T
13.3
GTEX-14ABY-2126-SM-5QGQZ
12.9
GTEX-131YS-0626-SM-5EGKL
12.9
GTEX-1117F-2826-SM-5GZXL
12.8
GTEX-XBED-1626-SM-47JYN
12.7
GTEX-U3ZN-1926-SM-4DXSG
12.7
GTEX-VUSG-2226-SM-4KKZO
12.5
GTEX-ZV6S-1826-SM-5NQ8D
12.5
GTEX-13CF2-2026-SM-5K7VI
12.4
GTEX-13NZB-2126-SM-5MR4Y
12.1
GTEX-13FTX-1126-SM-5N9EN
12.0
GTEX-ZPIC-1126-SM-5BC7F
12.0
GTEX-ZYWO-2326-SM-5GZY4
11.9
GTEX-13OW8-0226-SM-5K7UP
11.9
GTEX-13W46-0826-SM-5LU3H
11.8
GTEX-R53T-1526-SM-48FEK
11.8
GTEX-S33H-0326-SM-4AD6N
11.5
GTEX-U8XE-0826-SM-4E3J1
11.2
GTEX-Y111-2026-SM-4SOJA
11.2
GTEX-ZEX8-2226-SM-57WC6
11.1
GTEX-12WSM-1726-SM-5BC6J
10.9
GTEX-T2YK-2226-SM-32QPT
10.9
GTEX-1192X-2326-SM-5987X
10.8
GTEX-YJ8O-2226-SM-5IFHW
10.8
GTEX-13O3P-0826-SM-5L3DH
10.8
GTEX-14753-2426-SM-5LU8U
10.7
GTEX-S7SE-0826-SM-4AT4D
10.7
GTEX-11NSD-0926-SM-5N9DR
10.6
GTEX-11NV4-2026-SM-5N9DG
10.5
GTEX-11DZ1-0326-SM-5N9BN
10.5
GTEX-RUSQ-2026-SM-4GIAK
10.3
GTEX-S32W-2026-SM-4AD6E
10.3
GTEX-XV7Q-2326-SM-4BRVZ
10.2
GTEX-WFON-1826-SM-3GILG
10.2
GTEX-11LCK-2426-SM-5HL5F
10.2
GTEX-TKQ2-1826-SM-33HB2
10.1
GTEX-12WSN-1326-SM-5GCNT
10.1
GTEX-XMD1-0826-SM-4AT52
10.1
GTEX-12WSB-0626-SM-59HJO
9.9
GTEX-REY6-2426-SM-48FF5
9.9
GTEX-11O72-2126-SM-5N9FO
9.9
GTEX-132AR-0826-SM-5EGK6
9.9
GTEX-11I78-2226-SM-5PNYA
9.8
GTEX-11OF3-1926-SM-59889
9.4
GTEX-UTHO-1026-SM-3GAF7
9.4
GTEX-132Q8-1426-SM-5EGK7
9.2
GTEX-139TU-0626-SM-5KM3X
9.1
GTEX-S4Q7-1126-SM-4AD6R
8.8
GTEX-117XS-1926-SM-5GICO
8.8
GTEX-13O61-1826-SM-5KM4I
8.7
GTEX-QVJO-1826-SM-447C9
8.6
GTEX-144GL-2026-SM-5LU3O
8.5
GTEX-ZLFU-2126-SM-4WWEV
8.5
GTEX-ZUA1-1526-SM-59HLS
8.4
GTEX-ZYFC-0826-SM-5E44K
8.4
GTEX-145MN-1926-SM-5SIAI
8.3
GTEX-12BJ1-1826-SM-5HL9N
8.3
GTEX-13O3Q-2226-SM-5KM4O
8.1
GTEX-YFCO-1826-SM-4W1YH
8.1
GTEX-ZWKS-2826-SM-5NQ74
7.9
GTEX-ZDTT-2126-SM-5S2OJ
7.9
GTEX-YEC3-1026-SM-5IFI5
7.8
GTEX-Y5V6-2126-SM-4WWFX
7.8
GTEX-XQ8I-2426-SM-4WAXY
7.7
GTEX-13S86-1226-SM-5S2OA
7.5
GTEX-11DXY-2326-SM-5GICW
7.3
GTEX-144GM-0926-SM-5O994
7.3
GTEX-XGQ4-0926-SM-4AT4U
7.2
GTEX-ZT9W-2026-SM-51MRA
7.1
GTEX-YB5E-1726-SM-5IFJ3
7.1
GTEX-ZYW4-0826-SM-5GIDG
7.0
GTEX-X4XY-0926-SM-4E3JD
7.0
GTEX-11EQ9-1826-SM-5Q5AJ
7.0
GTEX-PSDG-1626-SM-48TCQ
7.0
GTEX-117YX-1426-SM-5H12H
6.9
GTEX-11WQK-2426-SM-5GU5C
6.9
GTEX-145ME-1526-SM-5Q5F2
6.8
GTEX-ZZ64-1226-SM-5E43R
6.7
GTEX-11ONC-2126-SM-5HL6E
6.7
GTEX-12KS4-0126-SM-5Q5A5
6.7
GTEX-ZA64-1526-SM-5CVMD
6.6
GTEX-YB5K-1626-SM-5IFIN
6.2
GTEX-11GSO-1926-SM-5A5K3
6.2
GTEX-R55D-0826-SM-48FEA
6.2
GTEX-ZQG8-0726-SM-5P9H9
6.1
GTEX-139T6-1626-SM-5PNYZ
6.1
GTEX-13FTW-1426-SM-5LZWZ
6.1
GTEX-Y8E4-1626-SM-5S2MW
6.0
GTEX-11ZUS-0826-SM-5FQUY
5.8
GTEX-XQ3S-1326-SM-4BOPQ
5.8
GTEX-ZDYS-1126-SM-5K7UB
5.8
GTEX-11TUW-1826-SM-5BC5D
5.7
GTEX-ZYT6-0126-SM-5E45J
5.7
GTEX-WY7C-2726-SM-3NB3P
5.5
GTEX-132NY-0826-SM-5K7Y7
5.5
GTEX-13CF3-2126-SM-5IFJP
5.2
GTEX-ZDXO-0126-SM-5S2ND
5.1
GTEX-Y9LG-1426-SM-5IFJZ
5.1
GTEX-11ZTT-2326-SM-5EQLG
5.0
GTEX-11P82-1326-SM-5HL62
5.0
GTEX-13PVQ-1026-SM-5KM3M
4.8
GTEX-ZAB4-2526-SM-5HL8M
4.6
GTEX-13N1W-0626-SM-5MR4U
4.4
GTEX-QMRM-1626-SM-4R1KV
4.4
GTEX-ZQUD-1926-SM-51MSA
4.4
GTEX-XMK1-1126-SM-4IHJ8
3.8
GTEX-11DXZ-1926-SM-5GZZL
3.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.