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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 119.1
Min RPKM: 3
Std RPKM: 21.1
Median RPKM: 16.4
GTEX-13111-1326-SM-5GCNO
119.1
GTEX-11EQ9-1726-SM-5HL6U
110.8
GTEX-OOBK-2025-SM-3LK5S
85.4
GTEX-12696-2226-SM-5EQ65
82.0
GTEX-131XF-1926-SM-5DUW4
80.7
GTEX-ZVP2-0826-SM-59HJ6
67.7
GTEX-S3XE-1326-SM-4AD4H
67.1
GTEX-12BJ1-1226-SM-5LUAE
61.7
GTEX-ZLFU-1726-SM-4WWBU
53.6
GTEX-14C5O-2826-SM-5RQI6
49.4
GTEX-XPVG-2026-SM-4B65E
48.8
GTEX-WK11-2626-SM-4OOSK
45.3
GTEX-1399R-0526-SM-5IJEF
42.7
GTEX-VJYA-1226-SM-3GIJ6
42.1
GTEX-ZDYS-1226-SM-5IJF3
36.9
GTEX-SNOS-1026-SM-4DM4Y
36.1
GTEX-111YS-1726-SM-5GIED
33.8
GTEX-QV31-1026-SM-4R1K3
31.5
GTEX-13RTJ-2126-SM-5S2PZ
31.2
GTEX-WFG7-1826-SM-3GIL1
30.5
GTEX-11P82-1126-SM-5BC5K
29.6
GTEX-U3ZM-0926-SM-4DXSW
29.5
GTEX-ZT9W-1626-SM-4YCDQ
29.3
GTEX-11ZUS-2126-SM-5N9E6
28.8
GTEX-Y9LG-1826-SM-4VBQC
27.9
GTEX-XMK1-1026-SM-4B65H
26.6
GTEX-PLZ6-1126-SM-3P5ZR
26.5
GTEX-11P7K-0626-SM-5985Z
25.7
GTEX-WH7G-1726-SM-4LVKY
25.4
GTEX-ZPU1-2026-SM-57WFI
23.8
GTEX-OOBJ-2026-SM-3NB1R
23.2
GTEX-XAJ8-0626-SM-47JY4
22.4
GTEX-146FQ-1726-SM-5QGPX
22.3
GTEX-132QS-1126-SM-5P9GC
22.2
GTEX-12C56-1326-SM-5FQSV
21.8
GTEX-11TT1-2026-SM-5EQM8
21.7
GTEX-144GM-0826-SM-5O98R
20.7
GTEX-ZTX8-1026-SM-5EGHD
20.6
GTEX-V955-1826-SM-4JBIL
19.9
GTEX-RM2N-1126-SM-48FCY
19.8
GTEX-1399T-1226-SM-5P9J5
19.1
GTEX-REY6-2126-SM-48FD9
18.2
GTEX-13NYS-1026-SM-5KLZT
18.1
GTEX-14ABY-0726-SM-5Q5DF
18.1
GTEX-U8XE-2526-SM-4E3IT
17.8
GTEX-YF7O-1926-SM-4W1YQ
17.8
GTEX-111FC-2026-SM-5GZYO
17.7
GTEX-111CU-1526-SM-5N9FS
17.6
GTEX-YB5E-1826-SM-5IFI4
17.0
GTEX-14E6E-1126-SM-5S2R4
16.9
GTEX-ZZ64-0926-SM-5E44L
16.9
GTEX-T8EM-1826-SM-4DM7F
16.6
GTEX-SNMC-0926-SM-4DM5U
16.5
GTEX-XQ3S-2526-SM-4BOOG
16.3
GTEX-YJ8A-1126-SM-5IFJU
16.1
GTEX-13FTW-1226-SM-5LZZ1
15.8
GTEX-NPJ8-2426-SM-3MJHL
15.0
GTEX-S95S-1026-SM-4B64M
14.9
GTEX-11WQK-2726-SM-5EQMU
14.3
GTEX-QMRM-1426-SM-4R1K8
14.1
GTEX-117YX-1526-SM-5H12T
14.0
GTEX-S4Q7-1026-SM-4AD75
14.0
GTEX-WFG8-1826-SM-4LVM4
13.8
GTEX-ZY6K-1526-SM-5GZXE
13.4
GTEX-RWSA-2026-SM-47JX8
13.4
GTEX-Q2AI-1126-SM-48U19
13.3
GTEX-U4B1-1426-SM-4DXTX
13.2
GTEX-145LV-1226-SM-5S2QH
13.1
GTEX-OIZH-2026-SM-3NB1M
12.9
GTEX-WFON-1626-SM-4LVMV
12.8
GTEX-X5EB-1826-SM-4E3K8
12.7
GTEX-139T6-1526-SM-5P9G6
12.5
GTEX-U412-2026-SM-4DXSI
12.2
GTEX-Y8E4-2126-SM-5RQHO
12.1
GTEX-NFK9-2226-SM-3MJGP
11.9
GTEX-WOFM-0326-SM-4OOSL
11.5
GTEX-145LT-0626-SM-5O99E
11.5
GTEX-11O72-2726-SM-5HL6K
10.9
GTEX-S33H-1826-SM-4AD65
10.8
GTEX-14BMV-2326-SM-5RQJ4
10.8
GTEX-13O21-1126-SM-5N9EV
10.5
GTEX-13O61-1726-SM-5KM46
10.1
GTEX-XGQ4-1826-SM-4AT6F
9.8
GTEX-13FHO-2826-SM-5K7ZA
9.6
GTEX-XOTO-2826-SM-4B65I
9.1
GTEX-11NSD-0826-SM-5986S
8.9
GTEX-11TUW-2126-SM-5GU7B
8.6
GTEX-SJXC-2026-SM-4DM6N
7.9
GTEX-13FXS-2826-SM-5LZYC
7.8
GTEX-UTHO-2726-SM-4JBH9
7.2
GTEX-QLQ7-1326-SM-4R1JY
7.2
GTEX-WZTO-0926-SM-4PQZ3
7.1
GTEX-13OW8-0426-SM-5J2NR
7.0
GTEX-117YW-1426-SM-5EGGO
6.8
GTEX-11DYG-2526-SM-5N9BB
6.7
GTEX-13N2G-1826-SM-5KM1I
6.5
GTEX-QV44-1526-SM-4R1KI
6.1
GTEX-148VJ-1826-SM-5Q5DV
6.0
GTEX-QEG4-2226-SM-4R1JM
5.9
GTEX-V1D1-1926-SM-4JBGX
5.9
GTEX-12ZZZ-2026-SM-5LZWJ
5.9
GTEX-132NY-2826-SM-5P9G2
5.2
GTEX-ZTTD-2726-SM-57WFA
5.0
GTEX-13G51-2326-SM-5LZXV
4.8
GTEX-11OF3-1726-SM-5GU5Q
4.7
GTEX-ZUA1-2826-SM-59HLE
3.0
Show all
PROSTATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.