We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 49.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 55.1
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 57.3
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 47.0
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 45.0
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 37.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 40.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 51.0
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 51.0
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 41.9
Min RPKM: 10.3
Std RPKM: 5.2
Median RPKM: 21.2
GTEX-WFON-2026-SM-4LVMW
41.9
GTEX-YEC4-1526-SM-4W1YU
37.7
GTEX-S33H-0126-SM-4AD62
32.8
GTEX-ZTX8-1126-SM-51MRM
32.7
GTEX-QLQ7-1426-SM-4R1JX
32.2
GTEX-WFG8-1926-SM-4LVM1
31.5
GTEX-R55C-1426-SM-48FED
31.1
GTEX-13FTW-1326-SM-5LZZD
30.5
GTEX-Y9LG-1726-SM-4VBQE
29.8
GTEX-PLZ5-1526-SM-3P5ZX
29.6
GTEX-14A6H-2326-SM-5Q5B5
29.5
GTEX-ZDTT-2026-SM-5K7TY
29.2
GTEX-13O61-2026-SM-5J2M6
29.1
GTEX-144GN-1626-SM-5Q5BU
29.1
GTEX-U3ZM-1626-SM-4DXSK
28.6
GTEX-XBED-2026-SM-4AT5D
28.4
GTEX-O5YT-2126-SM-3MJGD
28.3
GTEX-1339X-1926-SM-5PNVP
27.9
GTEX-YFCO-1726-SM-4W21S
27.8
GTEX-Y8E4-2226-SM-5LU94
27.8
GTEX-XMK1-2026-SM-4B65K
27.8
GTEX-XGQ4-2026-SM-4AT6G
27.7
GTEX-13OVH-0726-SM-5N9BU
27.3
GTEX-12C56-1426-SM-5FQSW
27.2
GTEX-Y5V6-1726-SM-4VDSZ
27.1
GTEX-QLQW-1026-SM-447A9
27.0
GTEX-111CU-1726-SM-5EGHM
27.0
GTEX-SUCS-1326-SM-4DM5T
26.8
GTEX-147F4-0626-SM-5LUAK
26.8
GTEX-XPT6-1626-SM-4B655
26.7
GTEX-YB5E-1926-SM-5IFIG
26.7
GTEX-ZT9W-2226-SM-57WFU
26.7
GTEX-P4QS-2126-SM-3NMCF
26.1
GTEX-OIZI-0126-SM-3NB13
25.8
GTEX-ZAB4-0126-SM-5CVMG
25.8
GTEX-U3ZH-1526-SM-4DXV1
25.7
GTEX-11ONC-2226-SM-5HL6D
25.6
GTEX-ZUA1-2726-SM-59HLJ
25.6
GTEX-XPVG-2226-SM-4B65U
25.3
GTEX-TKQ1-0926-SM-4DXU2
25.3
GTEX-T5JC-0726-SM-4DM55
25.1
GTEX-WHSB-2126-SM-4M1XF
25.0
GTEX-1212Z-0326-SM-5FQSJ
25.0
GTEX-OXRL-2126-SM-3NM98
24.9
GTEX-ZZ64-1126-SM-5GZXY
24.8
GTEX-YJ89-0626-SM-4TT3Z
24.8
GTEX-SNMC-1026-SM-4DM7K
24.7
GTEX-S7SE-0326-SM-4AT5Q
24.6
GTEX-QMRM-1526-SM-4R1K6
24.5
GTEX-13N2G-0126-SM-5N9DV
24.5
GTEX-OIZH-2126-SM-3NB1P
24.2
GTEX-11P7K-1026-SM-5HL6Y
24.2
GTEX-13O21-1226-SM-5J2MK
24.2
GTEX-13NZB-2026-SM-5MR4M
24.0
GTEX-NFK9-0126-SM-3LK5H
23.9
GTEX-WVLH-2626-SM-4MVNV
23.9
GTEX-TKQ2-1526-SM-4DXUN
23.8
GTEX-S3XE-1526-SM-4AD5A
23.5
GTEX-11EI6-2226-SM-5EGJM
23.5
GTEX-U4B1-1526-SM-4DXSL
23.5
GTEX-139T6-1226-SM-5IFFC
23.5
GTEX-QV44-1726-SM-4R1KG
23.4
GTEX-11O72-0726-SM-5P9GO
23.4
GTEX-ZPU1-2126-SM-57WED
23.3
GTEX-X3Y1-2626-SM-4PQZI
23.1
GTEX-X261-2326-SM-4PQYU
23.1
GTEX-147JS-0126-SM-5S2TW
23.1
GTEX-13NYB-2226-SM-5MR58
22.9
GTEX-RM2N-1326-SM-48FCW
22.7
GTEX-11P82-1526-SM-5BC5M
22.6
GTEX-S4Q7-1226-SM-4AD5I
22.5
GTEX-YEC3-1726-SM-5IFIK
22.5
GTEX-SNOS-1126-SM-4DM67
22.4
GTEX-13OW6-0126-SM-5IJGM
22.4
GTEX-YF7O-2026-SM-4W1YE
22.4
GTEX-RWSA-2426-SM-47JXR
22.4
GTEX-Q2AI-1226-SM-48U14
22.0
GTEX-132QS-1226-SM-5P9GD
21.9
GTEX-R55E-0726-SM-48FCZ
21.9
GTEX-139TT-2226-SM-5LZWO
21.8
GTEX-ZA64-1626-SM-5CVME
21.8
GTEX-ZT9X-1426-SM-5DUX1
21.8
GTEX-ZDYS-1326-SM-5IJFF
21.7
GTEX-ZYT6-2726-SM-5GICP
21.6
GTEX-ZVTK-0126-SM-57WDG
21.4
GTEX-XBEC-0126-SM-4GIDT
21.3
GTEX-Q2AH-1526-SM-48TZG
21.2
GTEX-ZTSS-1526-SM-51MTC
21.2
GTEX-11NSD-1026-SM-5N9BE
21.1
GTEX-14753-0626-SM-5Q5CY
21.1
GTEX-PW2O-1426-SM-48TCD
21.0
GTEX-145MH-2326-SM-5O9AW
20.9
GTEX-1399Q-2826-SM-5IJEZ
20.9
GTEX-RN64-2326-SM-48FDW
20.9
GTEX-XAJ8-1326-SM-47JYT
20.8
GTEX-WOFM-1126-SM-4OOSB
20.6
GTEX-QV31-1126-SM-4R1K4
20.6
GTEX-WZTO-0326-SM-4PQYZ
20.5
GTEX-13NZA-2526-SM-5IJFX
20.2
GTEX-145LT-0426-SM-5LUAP
20.2
GTEX-UPJH-0126-SM-4IHLL
19.8
GTEX-111FC-1926-SM-5GZYC
19.8
GTEX-144GL-0726-SM-5LU4P
19.8
GTEX-12WSH-0326-SM-5GCNH
19.8
GTEX-12WSI-2126-SM-5GCMV
19.8
GTEX-R55D-0126-SM-48FEL
19.7
GTEX-111YS-2026-SM-5EGGL
19.6
GTEX-11GS4-2026-SM-5N9CP
19.5
GTEX-ZV7C-2026-SM-5NQ8F
19.5
GTEX-VJYA-1426-SM-4KL1Y
19.5
GTEX-ZQUD-2026-SM-51MSM
19.4
GTEX-S95S-1126-SM-4B64E
19.4
GTEX-OOBJ-2126-SM-3NB1N
19.0
GTEX-OHPM-2126-SM-3LK75
18.9
GTEX-11DXZ-2126-SM-59881
18.7
GTEX-11EQ9-1926-SM-5PNVV
18.7
GTEX-13112-0226-SM-5P9IV
18.6
GTEX-X5EB-2026-SM-4E3KA
18.5
GTEX-13FLW-2126-SM-5N9FD
18.5
GTEX-131XE-0426-SM-5IJF4
18.5
GTEX-V955-1926-SM-4KL1L
18.4
GTEX-T6MN-2026-SM-4DM7L
18.4
GTEX-ZAB5-2426-SM-5CVMW
18.4
GTEX-117XS-2026-SM-5GID1
18.3
GTEX-12ZZY-0126-SM-5LZV2
18.3
GTEX-11EQ8-1426-SM-5EGJR
18.2
GTEX-139TS-1726-SM-5IJG5
18.0
GTEX-ZVZP-2226-SM-57WBF
17.9
GTEX-11WQC-2326-SM-5EQKE
17.9
GTEX-13OVL-0426-SM-5IFG6
17.8
GTEX-T8EM-0126-SM-4DM5R
17.7
GTEX-13111-1526-SM-5EGJX
17.3
GTEX-11OF3-1826-SM-5987N
17.3
GTEX-11WQK-2826-SM-5EQKH
17.2
GTEX-V1D1-2126-SM-4JBH4
17.2
GTEX-11NUK-2626-SM-5A5MB
17.0
GTEX-144GM-0426-SM-5Q5C8
16.9
GTEX-13OW5-2526-SM-5L3I1
16.8
GTEX-1399R-1626-SM-5P9GG
16.8
GTEX-13FHP-2826-SM-5IJFW
16.7
GTEX-U8T8-1126-SM-4DXUE
16.6
GTEX-XLM4-1526-SM-4AT6D
16.4
GTEX-12WSL-2326-SM-5DUXQ
16.4
GTEX-13N1W-2626-SM-5IJEP
16.4
GTEX-WK11-0326-SM-4OOS6
16.3
GTEX-145MO-0126-SM-5S2QU
16.1
GTEX-13VXU-0726-SM-5J2O7
16.1
GTEX-OOBK-2126-SM-3LK5T
16.0
GTEX-XQ3S-2726-SM-4BOP2
16.0
GTEX-REY6-0126-SM-48FDT
15.9
GTEX-12696-0226-SM-5EGL3
15.9
GTEX-QEG4-0126-SM-48TZE
15.7
GTEX-11TT1-2226-SM-5GU6B
15.5
GTEX-S7PM-0626-SM-4AD4Q
15.2
GTEX-WH7G-1926-SM-4LVMM
15.2
GTEX-ZYFC-0126-SM-5GIEH
15.1
GTEX-QEG5-0126-SM-4R1JR
14.5
GTEX-11ZUS-2726-SM-5FQUA
14.4
GTEX-11NV4-1726-SM-5N9FC
14.4
GTEX-117YW-1526-SM-5EGGP
14.3
GTEX-Z93S-1726-SM-5HL8G
14.1
GTEX-N7MS-0126-SM-3TW8O
14.1
GTEX-Y111-2426-SM-4TT23
13.8
GTEX-14ABY-0626-SM-5Q5C9
13.7
GTEX-12WSM-1326-SM-5GCP9
13.7
GTEX-11LCK-2326-SM-5HL53
12.9
GTEX-11TUW-2226-SM-5EQL9
12.8
GTEX-13O1R-0726-SM-5IJEI
12.1
GTEX-U8XE-0126-SM-4E3I3
10.7
GTEX-RUSQ-2126-SM-47JXK
10.6
GTEX-111VG-1926-SM-5GIDO
10.4
GTEX-P4QR-0226-SM-3NMCH
10.3
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.