CASP1

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:31.2 FPKM
GTEx:10.5 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA003056

 

Antibody CAB002685

 

Endothelial cells

Medium   Low  

Glandular cells

Medium   Not available  

Peripheral nerve/ganglion

Medium   Medium  
   
   
   

COLON - HPA RNA-seq

? »

Average FPKM

31.2

overview Male, age 54
Sample 1
FPKM: 37.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 29.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 14.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 31.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 33.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 47.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

10.5

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 4.9
Samples: 149

Max RPKM: 15.7
Min RPKM: 1.5
Std RPKM: 2.4
Median RPKM: 4.7
GTEX-ZAJG-2626-SM-5S2NU 15.7
GTEX-132AR-2826-SM-5IJFV 13.1
GTEX-147GR-2826-SM-5RQK8 11.4
GTEX-11ONC-1926-SM-5GU75 11.2
GTEX-11WQK-2526-SM-5CVL8 10.6
GTEX-13SLW-2826-SM-5Q5ES 10.4
GTEX-ZAB4-2426-SM-5HL8A 10.2
GTEX-YJ8A-1726-SM-5P9IQ 10.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 16.1
Samples: 196

Max RPKM: 82.6
Min RPKM: 1.4
Std RPKM: 13.1
Median RPKM: 13.4
GTEX-11TT1-1026-SM-5PNW7 82.6
GTEX-PWOO-1326-SM-48TCJ 71.1
GTEX-XV7Q-2126-SM-4BRVX 69.9
GTEX-144GM-1226-SM-5LU52 69.0
GTEX-XMK1-1726-SM-4B64Z 68.1
GTEX-ZVP2-1526-SM-5NQ82 49.7
GTEX-Q2AH-1226-SM-48TZL 47.5
GTEX-132AR-2726-SM-5PNVN 45.4
Show all