IDH1

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:98.5 FPKM
GTEx:27.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA035248

 

Antibody HPA057936

 

Antibody CAB033218

 

Antibody CAB062556

 

Endothelial cells

Not detected   Low   Not detected   Not detected  

Glandular cells

Low   Low   Medium   Not detected  

Peripheral nerve/ganglion

Not detected   Not available   Not detected   Not detected  
       
       

COLON - HPA RNA-seq

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Average FPKM

98.5

overview Male, age 54
Sample 1
FPKM: 115.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 85.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 109.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 104.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 54.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 84.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 136.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

27.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 9.3
Samples: 149

Max RPKM: 23.5
Min RPKM: 3.1
Std RPKM: 3.2
Median RPKM: 8.9
GTEX-XBED-1726-SM-47JYO 23.5
GTEX-132AR-2826-SM-5IJFV 19.1
GTEX-V955-1726-SM-4JBHF 16.5
GTEX-146FH-2426-SM-5Q5EW 16.5
GTEX-Y5LM-1426-SM-5RQJL 16.4
GTEX-XV7Q-2226-SM-4BRVY 15.7
GTEX-11EQ9-1526-SM-5PNY7 15.5
GTEX-WQUQ-2626-SM-4MVNP 15.0
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 44.7
Samples: 196

Max RPKM: 128.1
Min RPKM: 3.1
Std RPKM: 28.9
Median RPKM: 44.4
GTEX-T5JW-1126-SM-4DM5V 128.1
GTEX-1399R-2226-SM-5P9JB 107.5
GTEX-U4B1-1126-SM-4DXV3 102.3
GTEX-WFG7-1526-SM-4LVMG 101.7
GTEX-131XG-1826-SM-5LZV4 98.9
GTEX-11P82-1026-SM-5BC5J 95.8
GTEX-111CU-1426-SM-5GZYP 95.7
GTEX-ZF2S-1926-SM-4WWAN 93.5
Show all