SCARB2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:72.7 FPKM
GTEx:41.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA018014

 

Antibody CAB015415

 

Endothelial cells

Medium   Low  

Glandular cells

High   High  

Peripheral nerve/ganglion

High   High  
   
   

COLON - HPA RNA-seq

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Average FPKM

72.7

overview Male, age 54
Sample 1
FPKM: 74.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 81.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 69.9
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 67.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 99.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 37.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 78.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

41.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 40.3
Samples: 149

Max RPKM: 68.2
Min RPKM: 21.2
Std RPKM: 7
Median RPKM: 39.7
GTEX-13SLW-2826-SM-5Q5ES 68.2
GTEX-11WQK-2526-SM-5CVL8 58.6
GTEX-132AR-2826-SM-5IJFV 58.6
GTEX-WHPG-1626-SM-4M1ZL 55.6
GTEX-14E6E-1726-SM-5S2R6 51.7
GTEX-XUZC-1526-SM-4BRV4 51.6
GTEX-131XG-1526-SM-5GCNQ 51.6
GTEX-139D8-2926-SM-5IJBM 51.3
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 43.5
Samples: 196

Max RPKM: 65.8
Min RPKM: 23.5
Std RPKM: 8.7
Median RPKM: 42.8
GTEX-11TTK-2426-SM-5PNYO 65.8
GTEX-ZYWO-1626-SM-5E44H 65.5
GTEX-14E6E-1526-SM-5RQIG 64.1
GTEX-12ZZZ-2426-SM-5GCNN 64.1
GTEX-13O3O-2526-SM-5L3DR 63.3
GTEX-ZXES-1626-SM-5NQ7L 63.1
GTEX-O5YW-1426-SM-3MJHF 62.7
GTEX-11EM3-1526-SM-5A5KN 62.3
Show all