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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1371.7
nTPM
Monaco:
1130.9
nTPM
Schmiedel:
894.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1371.7
HPA sample
nTPM
gdT-cell nTPM: 563.9
Samples: 6
Max nTPM: 846.1
Min nTPM: 291.9
P10809_1007
846.1
P10809_1022
457.4
P10809_1041
797.0
P10809_1060
291.9
P10809_1077
471.6
P10809_1098
519.1
MAIT T-cell nTPM: 934.9
Samples: 6
Max nTPM: 1345.5
Min nTPM: 765.9
P10809_1006
871.9
P10809_1024
784.5
P10809_1043
1074.6
P10809_1062
767.2
P10809_1083
765.9
P10809_1097
1345.5
Memory CD4 T-cell nTPM: 1100.3
Samples: 6
Max nTPM: 1586.6
Min nTPM: 574.3
P10809_1014
1586.6
P10809_1026
1565.1
P10809_1045
1227.2
P10809_1064
864.7
P10809_1086
574.3
P10809_1113
783.8
Memory CD8 T-cell nTPM: 864.6
Samples: 5
Max nTPM: 1154.5
Min nTPM: 686.1
P10809_1012
1154.5
P10809_1027
815.0
P10809_1046
888.7
P10809_1065
686.1
P10809_1111
778.8
Naive CD4 T-cell nTPM: 1371.7
Samples: 6
Max nTPM: 2478.5
Min nTPM: 835.1
P10809_1015
1266.2
P10809_1030
1565.1
P10809_1049
2478.5
P10809_1068
1072.0
P10809_1085
1013.2
P10809_1112
835.1
Naive CD8 T-cell nTPM: 1038.1
Samples: 6
Max nTPM: 1411.8
Min nTPM: 399.9
P10809_1016
1276.9
P10809_1031
1411.8
P10809_1050
1199.1
P10809_1069
916.8
P10809_1087
399.9
P10809_1110
1024.2
T-reg nTPM: 847.1
Samples: 6
Max nTPM: 1574.8
Min nTPM: 556.2
P10809_1018
556.2
P10809_1037
743.0
P10809_1056
1574.8
P10809_1075
782.6
P10809_1094
574.3
P10809_1106
851.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1130.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1001.5
Samples: 4
Max nTPM: 1499.0
Min nTPM: 713.6
RHH5202_R3573
896.4
RHH5230_R3602
896.8
RHH5259_R3631
713.6
RHH5288_R3660
1499.0
Effector memory CD8 T-cell nTPM: 419.5
Samples: 4
Max nTPM: 506.5
Min nTPM: 225.3
RHH5203_R3574
484.3
RHH5231_R3603
506.5
RHH5260_R3632
461.7
RHH5289_R3661
225.3
MAIT T-cell nTPM: 1012.9
Samples: 4
Max nTPM: 1473.7
Min nTPM: 599.7
RHH5233_R3605
918.5
RHH5205_R3576
599.7
RHH5262_R3634
1059.5
RHH5297_R3663
1473.7
Memory CD4 T-cell TFH nTPM: 1124.5
Samples: 4
Max nTPM: 1528.3
Min nTPM: 684.3
RHH5300_R3666
1528.3
RHH5236_R3608
1354.2
RHH5265_R3637
684.3
RHH5208_R3579
931.3
Memory CD4 T-cell Th1 nTPM: 1113.2
Samples: 4
Max nTPM: 1850.1
Min nTPM: 781.9
RHH5210_R3581
935.4
RHH5302_R3668
1850.1
RHH5238_R3610
885.3
RHH5267_R3639
781.9
Memory CD4 T-cell Th1/Th17 nTPM: 1103.3
Samples: 4
Max nTPM: 1567.8
Min nTPM: 635.4
RHH5303_R3669
1567.8
RHH5211_R3582
1142.1
RHH5239_R3611
635.4
RHH5268_R3640
1068.0
Memory CD4 T-cell Th17 nTPM: 786.9
Samples: 4
Max nTPM: 1145.9
Min nTPM: 490.5
RHH5304_R3670
844.7
RHH5212_R3583
1145.9
RHH5240_R3612
490.5
RHH5269_R3641
666.3
Memory CD4 T-cell Th2 nTPM: 1027.7
Samples: 4
Max nTPM: 1250.1
Min nTPM: 793.6
RHH5305_R3671
1155.4
RHH5213_R3584
911.6
RHH5241_R3613
1250.1
RHH5270_R3642
793.6
Naive CD4 T-cell nTPM: 1130.9
Samples: 4
Max nTPM: 1555.9
Min nTPM: 759.9
RHH5306_R3672
1555.9
RHH5214_R3585
1362.2
RHH5242_R3614
845.4
RHH5271_R3643
759.9
Naive CD8 T-cell nTPM: 1055.1
Samples: 4
Max nTPM: 1440.1
Min nTPM: 820.1
RHH5201_R3572
937.5
RHH5229_R3601
820.1
RHH5258_R3630
1440.1
RHH5287_R3659
1022.7
Non-Vd2 gdTCR nTPM: 575.0
Samples: 4
Max nTPM: 1049.9
Min nTPM: 367.6
RHH5235_R3607
381.6
RHH5264_R3636
501.0
RHH5207_R3578
367.6
RHH5299_R3665
1049.9
T-reg nTPM: 972.3
Samples: 4
Max nTPM: 1767.2
Min nTPM: 640.8
RHH5301_R3667
1767.2
RHH5237_R3609
771.8
RHH5266_R3638
640.8
RHH5209_R3580
709.3
Terminal effector memory CD4 T-cell nTPM: 523.9
Samples: 2
Max nTPM: 707.0
Min nTPM: 340.7
RHH5243_R3615
340.7
RHH5272_R3644
707.0
Terminal effector memory CD8 T-cell nTPM: 715.2
Samples: 4
Max nTPM: 1147.1
Min nTPM: 486.8
RHH5232_R3604
504.4
RHH5204_R3575
1147.1
RHH5261_R3633
486.8
RHH5296_R3662
722.4
Vd2 gdTCR nTPM: 1065.2
Samples: 4
Max nTPM: 1948.3
Min nTPM: 565.2
RHH5234_R3606
772.4
RHH5206_R3577
974.7
RHH5263_R3635
565.2
RHH5298_R3664
1948.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.