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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
463.1
nTPM
HPA Brain:
879.4
nTPM
GTEx:
463.1
nTPM
FANTOM5:
813.3
Scaled Tags Per Million
Pig:
756.2
nTPM
Mouse:
939.9
nTPM
Allen mouse:
19.0
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
879.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 654.0
2666
Male, age 74, left hemisphere
776.9
2411
Female, age 72, unknown
722.3
1827
Male, age 72, unknown
705.8
1870
Female, age 42, unknown
693.2
2019
Male, age 18, unknown
675.1
1833
Male, age 53, unknown
652.9
2828
Female, age 72, unknown
652.0
1830
Male, age 51, unknown
605.1
2219
Male, age 76, both hemispheres
553.8
2586
Male, age 75, left hemisphere
502.9
Dorsal raphe nucleus nTPM: 695.1
2298
Female, age 72, unknown
798.2
2047
Male, age 72, unknown
784.9
2750
Male, age 76, both hemispheres
739.8
1828
Male, age 53, unknown
626.5
2016
Female, age 72, unknown
526.4
Inferior colliculus nTPM: 598.7
2097
Female, age 72, unknown
668.6
1890
Male, age 53, unknown
582.6
2849
Male, age 72, unknown
572.0
1848
Female, age 42, unknown
571.5
Median raphe nucleus nTPM: 879.4
2220
Male, age 76, midline
879.4
Periaquaductal grey, anterior nTPM: 673.3
2502
Female, age 75, unknown
801.5
1795
Male, age 51, unknown
633.4
1947
Male, age 18, unknown
585.0
Periaquaductal grey, dorsal nTPM: 557.3
2464
Female, age 72, unknown
570.2
2850
Male, age 76, both hemispheres
563.9
1831
Male, age 72, unknown
547.7
1840
Male, age 53, unknown
547.4
Periaquaductal grey, lateral nTPM: 604.0
2272
Male, age 74, both hemispheres
672.1
2053
Male, age 18, unknown
606.5
2140
Male, age 76, both hemispheres
533.3
Pretectal area nTPM: 699.9
1944
Female, age 72, unknown
876.3
1816
Male, age 51, unknown
832.8
2007
Male, age 72, unknown
782.7
1817
Female, age 42, unknown
768.6
1815
Male, age 53, unknown
765.6
2667
Female, age 75, unknown
682.4
2273
Male, age 74, both hemispheres
645.2
2224
Female, age 72, unknown
632.0
2407
Male, age 75, both hemispheres
625.8
2825
Male, age 18, unknown
562.2
2316
Male, age 76, right hemisphere
524.9
Red nucleus nTPM: 651.5
2785
Male, age 18, unknown
740.1
1904
Male, age 53, unknown
708.8
2503
Female, age 72, unknown
697.6
1821
Female, age 72, unknown
687.7
2725
Female, age 75, unknown
685.6
1865
Male, age 51, unknown
654.3
2588
Male, age 74, left hemisphere
654.2
1954
Female, age 42, unknown
633.1
2584
Male, age 75, left hemisphere
617.5
2227
Male, age 72, unknown
597.3
2769
Male, age 72, unknown
594.9
2823
Male, age 76, right hemisphere
547.0
Substantia nigra nTPM: 623.8
1889
Female, age 72, unknown
760.5
1916
Female, age 42, unknown
740.5
1851
Male, age 51, unknown
676.5
1941
Male, age 53, unknown
664.4
2699
Male, age 18, unknown
613.2
2583
Male, age 75, right hemisphere
581.5
2590
Female, age 75, unknown
569.9
2409
Female, age 72, unknown
554.6
2665
Male, age 74, both hemispheres
540.3
2241
Male, age 72, unknown
536.2
Superior colliculus nTPM: 651.7
2261
Male, age 18, unknown
764.1
2587
Male, age 74, left hemisphere
744.7
2087
Female, age 72, unknown
721.8
1913
Female, age 42, unknown
698.9
1796
Male, age 53, unknown
695.0
1995
Male, age 72, unknown
667.5
1895
Male, age 76, right hemisphere
610.3
1839
Male, age 51, unknown
591.2
2668
Female, age 75, unknown
559.7
2664
Male, age 75, both hemispheres
464.0
Ventral tegmental area nTPM: 637.7
2410
Female, age 72, unknown
702.0
2218
Male, age 76, both hemispheres
685.2
2223
Female, age 72, unknown
681.4
1915
Female, age 42, unknown
651.7
1942
Male, age 51, unknown
589.6
2021
Male, age 53, unknown
516.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
463.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 463.1
Samples: 139
Max nTPM: 1073.0
Min nTPM: 270.8
Std nTPM: 121.1
Median nTPM: 435.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
1073.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
837.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
740.4
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
729.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
714.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
699.2
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
691.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
682.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
668.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
655.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
630.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
630.1
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
624.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
624.4
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
622.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
618.0
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
589.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
587.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
586.8
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
586.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
584.9
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
577.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
573.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
566.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
563.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
562.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
560.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
556.2
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
555.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
551.8
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
548.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
547.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
545.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
538.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
536.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
535.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
530.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
530.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
527.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
521.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
517.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
516.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
498.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
495.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
489.9
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
488.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
486.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
482.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
481.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
480.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
478.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
478.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
474.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
471.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
470.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
468.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
464.9
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
464.7
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
458.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
456.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
455.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
452.7
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
443.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
441.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
438.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
437.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
436.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
435.8
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
435.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
435.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
434.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
431.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
428.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
428.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
427.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
426.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
425.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
424.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
422.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
420.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
417.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
414.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
414.2
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
413.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
413.5
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
411.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
411.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
410.3
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
408.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
406.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
405.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
402.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
402.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
401.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
398.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
398.1
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
395.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
385.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
384.9
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
384.6
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
382.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
382.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
381.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
379.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
379.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
377.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
377.2
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
376.6
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
376.2
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
371.1
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
370.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
363.3
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
363.1
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
363.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
360.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
358.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
354.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
353.2
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
349.9
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
348.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
345.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
343.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
342.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
336.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
336.5
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
331.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
322.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
321.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
320.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
320.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
318.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
317.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
317.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
306.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
298.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
293.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
285.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
276.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
270.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
939.9
Mouse sample
Sample description
nTPM
Midbrain nTPM: 940.0
Samples: 4
Max nTPM: 1001.1
Min nTPM: 874.4
Sample A
Male
874.4
Sample B
Male
931.0
Sample C
Female
1001.1
Sample D
Female
953.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.