PGD

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:42.7 FPKM
GTEx:19.9 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA031314

 

Endothelial cells

Not detected  

Glandular cells

Medium  

Peripheral nerve/ganglion

Low  
 

COLON - HPA RNA-seq

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Average FPKM

42.7

overview Male, age 54
Sample 1
FPKM: 44.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 42.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 48.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 23.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 42.0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 37.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 60.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

19.9

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 11.7
Samples: 149

Max RPKM: 59.6
Min RPKM: 5.4
Std RPKM: 5.3
Median RPKM: 10.1
GTEX-11TT1-0926-SM-5GU5M 59.6
GTEX-Y5LM-1426-SM-5RQJL 25.2
GTEX-12WSJ-1426-SM-5GCON 20.8
GTEX-11EQ9-1526-SM-5PNY7 20.5
GTEX-11DXX-1926-SM-5EGJK 18.8
GTEX-1339X-1726-SM-5P9J9 18.5
GTEX-12WSL-1826-SM-5LZW9 18.3
GTEX-XBED-1726-SM-47JYO 18.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 28.0
Samples: 196

Max RPKM: 158.1
Min RPKM: 7.2
Std RPKM: 18.7
Median RPKM: 25.2
GTEX-14C38-2626-SM-5RQI4 158.1
GTEX-13W3W-2126-SM-5K7UX 135.0
GTEX-11TT1-1026-SM-5PNW7 104.4
GTEX-144GN-1126-SM-5LU33 90.6
GTEX-QDVN-1326-SM-48TZ3 83.1
GTEX-O5YT-1426-SM-3MJHC 62.7
GTEX-QV31-0826-SM-4R1KR 52.6
GTEX-146FQ-1926-SM-5NQBY 52.5
Show all