BEST4

COLON - Expression summary

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RNA expression

HPA:15.2 FPKM
GTEx:15.1 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA058564

 

Endothelial cells

Not detected  

Glandular cells

Not detected  

Peripheral nerve/ganglion

Not detected  
 
 

COLON - HPA RNA-seq

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Average FPKM

15.2

overview Male, age 54
Sample 1
FPKM: 3.5
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 22.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 19.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 38.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 3.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 5.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 14.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

15.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.8
Samples: 149

Max RPKM: 15.1
Min RPKM: 0
Std RPKM: 2.1
Median RPKM: 0.2
GTEX-V955-1726-SM-4JBHF 15.1
GTEX-XBED-1726-SM-47JYO 14.2
GTEX-Y5LM-1426-SM-5RQJL 13.2
GTEX-146FH-2426-SM-5Q5EW 5.1
GTEX-ZPCL-1626-SM-57WGC 4.3
GTEX-ZQG8-2426-SM-57WEE 4.0
GTEX-YEC3-2026-SM-4WWFL 4.0
GTEX-11ONC-1926-SM-5GU75 3.7
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 29.3
Samples: 196

Max RPKM: 102.9
Min RPKM: 0
Std RPKM: 28.4
Median RPKM: 25.7
GTEX-PWN1-1426-SM-48TDF 102.9
GTEX-WOFM-2026-SM-4OOSQ 102.9
GTEX-14E6E-1526-SM-5RQIG 101.5
GTEX-1399S-1926-SM-5J2M5 98.2
GTEX-1399R-2226-SM-5P9JB 94.4
GTEX-132AR-2726-SM-5PNVN 94.2
GTEX-XUZC-1326-SM-4BRV2 92.6
GTEX-Y5LM-1526-SM-4VDTA 89.6
Show all