SETDB1

COLON - Expression summary

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RNA expression

HPA:9.0 FPKM
GTEx:7.6 RPKM

COLON - Immunohistochemistry

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Antibody staining

Antibody HPA018142

 

Endothelial cells

Low  

Glandular cells

High  

Peripheral nerve/ganglion

Low  
 
 
 

COLON - HPA RNA-seq

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Average FPKM

9.0

overview Male, age 54
Sample 1
FPKM: 7.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 10.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 9.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 5.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 8.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 9.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 12.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

7.6

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 7.5
Samples: 149

Max RPKM: 11.8
Min RPKM: 3
Std RPKM: 1.4
Median RPKM: 7.5
GTEX-XUW1-1826-SM-4BOQD 11.8
GTEX-145ME-1126-SM-5SIAT 11.0
GTEX-11P81-1426-SM-5P9JN 10.6
GTEX-148VJ-2426-SM-5NQ9Y 10.2
GTEX-WYVS-1126-SM-4SOJX 10.1
GTEX-13PVQ-2726-SM-5L3H7 9.9
GTEX-Y9LG-1326-SM-4VBQB 9.8
GTEX-ZPU1-1726-SM-4WWFV 9.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 7.6
Samples: 196

Max RPKM: 11
Min RPKM: 2.3
Std RPKM: 1.2
Median RPKM: 7.8
GTEX-11P81-1126-SM-5GU5G 11.0
GTEX-XXEK-1926-SM-4BRVD 10.2
GTEX-UJMC-1326-SM-4IHLS 10.0
GTEX-U3ZH-1326-SM-4DXSF 9.9
GTEX-13O3O-2526-SM-5L3DR 9.9
GTEX-PWN1-1426-SM-48TDF 9.8
GTEX-111YS-1626-SM-5GZZ9 9.7
GTEX-12KS4-2426-SM-5LU8P 9.7
Show all