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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
68.1
nTPM
HPA Brain:
81.1
nTPM
GTEx:
68.1
nTPM
FANTOM5:
148.0
Scaled Tags Per Million
Pig:
244.1
nTPM
Mouse:
320.7
nTPM
Allen mouse:
19.9
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
81.1
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 65.7
2586
Male, age 75, left hemisphere
76.7
2019
Male, age 18, unknown
75.7
1827
Male, age 72, unknown
71.8
2411
Female, age 72, unknown
68.5
2219
Male, age 76, both hemispheres
66.9
1870
Female, age 42, unknown
61.2
2828
Female, age 72, unknown
61.1
1833
Male, age 53, unknown
60.7
2666
Male, age 74, left hemisphere
59.9
1830
Male, age 51, unknown
54.4
Dorsal raphe nucleus nTPM: 68.0
2298
Female, age 72, unknown
82.4
1828
Male, age 53, unknown
75.6
2047
Male, age 72, unknown
70.4
2750
Male, age 76, both hemispheres
62.6
2016
Female, age 72, unknown
49.0
Inferior colliculus nTPM: 63.0
2097
Female, age 72, unknown
70.0
1848
Female, age 42, unknown
64.5
1890
Male, age 53, unknown
58.7
2849
Male, age 72, unknown
58.6
Median raphe nucleus nTPM: 67.0
2220
Male, age 76, midline
67.0
Periaquaductal grey, anterior nTPM: 68.1
1947
Male, age 18, unknown
71.3
1795
Male, age 51, unknown
70.8
2502
Female, age 75, unknown
62.3
Periaquaductal grey, dorsal nTPM: 56.2
1840
Male, age 53, unknown
62.2
2850
Male, age 76, both hemispheres
56.1
1831
Male, age 72, unknown
54.7
2464
Female, age 72, unknown
51.7
Periaquaductal grey, lateral nTPM: 56.4
2272
Male, age 74, both hemispheres
63.6
2053
Male, age 18, unknown
54.3
2140
Male, age 76, both hemispheres
51.3
Pretectal area nTPM: 73.1
2007
Male, age 72, unknown
94.0
1816
Male, age 51, unknown
89.2
1817
Female, age 42, unknown
89.2
2667
Female, age 75, unknown
86.2
1944
Female, age 72, unknown
84.3
1815
Male, age 53, unknown
72.3
2224
Female, age 72, unknown
70.0
2273
Male, age 74, both hemispheres
60.1
2825
Male, age 18, unknown
57.9
2316
Male, age 76, right hemisphere
53.1
2407
Male, age 75, both hemispheres
48.2
Red nucleus nTPM: 61.6
1821
Female, age 72, unknown
75.7
2725
Female, age 75, unknown
73.5
2785
Male, age 18, unknown
69.8
1954
Female, age 42, unknown
60.7
2584
Male, age 75, left hemisphere
59.3
2503
Female, age 72, unknown
58.5
1904
Male, age 53, unknown
57.9
1865
Male, age 51, unknown
57.6
2769
Male, age 72, unknown
57.6
2227
Male, age 72, unknown
56.4
2823
Male, age 76, right hemisphere
56.4
2588
Male, age 74, left hemisphere
55.9
Substantia nigra nTPM: 81.1
1916
Female, age 42, unknown
112.1
1851
Male, age 51, unknown
89.0
2241
Male, age 72, unknown
88.8
1889
Female, age 72, unknown
87.7
1941
Male, age 53, unknown
83.7
2665
Male, age 74, both hemispheres
82.6
2409
Female, age 72, unknown
72.0
2699
Male, age 18, unknown
68.1
2583
Male, age 75, right hemisphere
66.1
2590
Female, age 75, unknown
60.9
Superior colliculus nTPM: 62.6
2087
Female, age 72, unknown
74.9
1796
Male, age 53, unknown
73.5
2587
Male, age 74, left hemisphere
67.2
2261
Male, age 18, unknown
67.0
1895
Male, age 76, right hemisphere
65.9
1839
Male, age 51, unknown
62.5
2668
Female, age 75, unknown
61.2
2664
Male, age 75, both hemispheres
56.5
1913
Female, age 42, unknown
50.5
1995
Male, age 72, unknown
46.3
Ventral tegmental area nTPM: 72.9
2410
Female, age 72, unknown
91.0
1915
Female, age 42, unknown
86.0
2218
Male, age 76, both hemispheres
81.3
1942
Male, age 51, unknown
62.5
2223
Female, age 72, unknown
61.4
2021
Male, age 53, unknown
55.2
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
68.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 68.1
Samples: 139
Max nTPM: 146.4
Min nTPM: 33.1
Std nTPM: 21.2
Median nTPM: 63.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
146.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
133.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
132.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
131.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
116.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
115.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
110.3
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
110.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
106.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
103.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
101.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
101.0
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
100.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
100.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
98.3
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
95.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
95.4
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
93.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
91.7
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
91.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
90.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
87.9
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
87.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
85.1
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
84.7
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
84.0
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
84.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
83.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
82.2
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
81.4
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
81.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
79.6
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
79.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
79.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
78.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
78.6
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
76.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
75.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
74.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
74.5
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
74.2
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
74.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
74.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
72.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
72.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
72.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
72.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
71.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
70.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
70.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
70.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
69.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
69.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
69.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
69.2
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
68.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
67.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
67.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
67.6
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
66.5
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
66.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
65.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
65.6
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
65.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
65.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
64.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
64.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
64.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
63.9
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
63.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
63.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
63.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
61.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
61.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
60.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
60.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
60.5
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
60.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
59.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
59.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
59.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
59.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
58.6
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
58.5
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
58.3
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
58.3
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
58.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
57.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
57.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
57.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
56.8
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
56.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
56.7
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
56.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
56.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
56.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
56.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
56.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
55.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
55.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
54.7
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
54.4
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
54.2
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
54.2
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
54.1
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
53.7
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
53.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
53.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
52.4
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
52.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
51.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
51.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
51.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
51.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
50.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
50.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
50.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
49.7
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
49.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
49.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
49.0
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
48.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
47.5
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
47.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
46.7
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
46.1
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
45.9
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
45.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
42.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
42.8
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
42.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
42.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
40.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
39.6
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
39.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
39.3
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
34.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
34.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
33.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
320.7
Mouse sample
Sample description
nTPM
Midbrain nTPM: 320.7
Samples: 4
Max nTPM: 338.4
Min nTPM: 301.6
Sample A
Male
338.4
Sample B
Male
313.7
Sample C
Female
301.6
Sample D
Female
329.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.