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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
205.2
nTPM
Monaco:
1209.1
nTPM
Schmiedel:
989.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
205.2
HPA sample
nTPM
gdT-cell nTPM: 205.2
Samples: 6
Max nTPM: 262.5
Min nTPM: 167.3
P10809_1007
248.1
P10809_1022
262.5
P10809_1041
182.1
P10809_1060
167.3
P10809_1077
180.0
P10809_1098
190.9
MAIT T-cell nTPM: 152.0
Samples: 6
Max nTPM: 229.6
Min nTPM: 128.4
P10809_1006
229.6
P10809_1024
146.2
P10809_1043
128.4
P10809_1062
142.8
P10809_1083
132.8
P10809_1097
131.9
Memory CD4 T-cell nTPM: 111.8
Samples: 6
Max nTPM: 131.0
Min nTPM: 93.6
P10809_1014
126.1
P10809_1026
93.6
P10809_1045
100.9
P10809_1064
131.0
P10809_1086
121.4
P10809_1113
97.9
Memory CD8 T-cell nTPM: 163.5
Samples: 5
Max nTPM: 200.7
Min nTPM: 134.9
P10809_1012
200.7
P10809_1027
134.9
P10809_1046
164.9
P10809_1065
181.6
P10809_1111
135.6
Naive CD4 T-cell nTPM: 74.5
Samples: 6
Max nTPM: 99.8
Min nTPM: 40.1
P10809_1015
99.8
P10809_1030
69.6
P10809_1049
40.1
P10809_1068
72.4
P10809_1085
87.5
P10809_1112
77.4
Naive CD8 T-cell nTPM: 117.3
Samples: 6
Max nTPM: 168.7
Min nTPM: 79.9
P10809_1016
108.4
P10809_1031
107.6
P10809_1050
100.3
P10809_1069
138.6
P10809_1087
168.7
P10809_1110
79.9
T-reg nTPM: 94.7
Samples: 6
Max nTPM: 140.6
Min nTPM: 56.4
P10809_1018
140.6
P10809_1037
98.3
P10809_1056
56.4
P10809_1075
82.4
P10809_1094
96.0
P10809_1106
94.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1209.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 579.3
Samples: 4
Max nTPM: 676.3
Min nTPM: 469.9
RHH5202_R3573
595.2
RHH5230_R3602
469.9
RHH5259_R3631
676.3
RHH5288_R3660
575.8
Effector memory CD8 T-cell nTPM: 1075.7
Samples: 4
Max nTPM: 1159.5
Min nTPM: 959.5
RHH5203_R3574
1082.0
RHH5231_R3603
959.5
RHH5260_R3632
1159.5
RHH5289_R3661
1101.7
MAIT T-cell nTPM: 712.3
Samples: 4
Max nTPM: 907.8
Min nTPM: 581.9
RHH5233_R3605
769.8
RHH5205_R3576
907.8
RHH5262_R3634
589.7
RHH5297_R3663
581.9
Memory CD4 T-cell TFH nTPM: 460.0
Samples: 4
Max nTPM: 531.4
Min nTPM: 423.0
RHH5300_R3666
453.4
RHH5236_R3608
432.0
RHH5265_R3637
423.0
RHH5208_R3579
531.4
Memory CD4 T-cell Th1 nTPM: 623.9
Samples: 4
Max nTPM: 777.2
Min nTPM: 518.5
RHH5210_R3581
518.5
RHH5302_R3668
543.1
RHH5238_R3610
777.2
RHH5267_R3639
656.9
Memory CD4 T-cell Th1/Th17 nTPM: 730.1
Samples: 4
Max nTPM: 957.0
Min nTPM: 573.3
RHH5303_R3669
683.1
RHH5211_R3582
706.9
RHH5239_R3611
957.0
RHH5268_R3640
573.3
Memory CD4 T-cell Th17 nTPM: 628.0
Samples: 4
Max nTPM: 760.9
Min nTPM: 528.2
RHH5304_R3670
659.4
RHH5212_R3583
528.2
RHH5240_R3612
760.9
RHH5269_R3641
563.3
Memory CD4 T-cell Th2 nTPM: 528.2
Samples: 4
Max nTPM: 584.3
Min nTPM: 477.5
RHH5305_R3671
525.8
RHH5213_R3584
584.3
RHH5241_R3613
477.5
RHH5270_R3642
525.1
Naive CD4 T-cell nTPM: 394.1
Samples: 4
Max nTPM: 407.1
Min nTPM: 374.2
RHH5306_R3672
407.1
RHH5214_R3585
406.3
RHH5242_R3614
388.8
RHH5271_R3643
374.2
Naive CD8 T-cell nTPM: 398.4
Samples: 4
Max nTPM: 532.2
Min nTPM: 348.4
RHH5201_R3572
348.4
RHH5229_R3601
532.2
RHH5258_R3630
354.5
RHH5287_R3659
358.4
Non-Vd2 gdTCR nTPM: 1053.3
Samples: 4
Max nTPM: 1150.6
Min nTPM: 893.9
RHH5235_R3607
1075.8
RHH5264_R3636
1092.8
RHH5207_R3578
1150.6
RHH5299_R3665
893.9
T-reg nTPM: 427.1
Samples: 4
Max nTPM: 457.9
Min nTPM: 411.7
RHH5301_R3667
412.8
RHH5237_R3609
457.9
RHH5266_R3638
411.7
RHH5209_R3580
425.8
Terminal effector memory CD4 T-cell nTPM: 1010.4
Samples: 2
Max nTPM: 1048.2
Min nTPM: 972.6
RHH5243_R3615
1048.2
RHH5272_R3644
972.6
Terminal effector memory CD8 T-cell nTPM: 1209.1
Samples: 4
Max nTPM: 1533.2
Min nTPM: 966.9
RHH5232_R3604
1203.0
RHH5204_R3575
966.9
RHH5261_R3633
1533.2
RHH5296_R3662
1133.2
Vd2 gdTCR nTPM: 893.1
Samples: 4
Max nTPM: 1159.3
Min nTPM: 623.2
RHH5234_R3606
754.6
RHH5206_R3577
1159.3
RHH5263_R3635
1035.4
RHH5298_R3664
623.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.