MSN

SKIN - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:61.7 FPKM
GTEx:49.8 RPKM

SKIN 1 - Immunohistochemistry

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Annotated protein
expression

Fibroblasts:Low
Keratinocytes:Low
Langerhans:Medium
Melanocytes:Low

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA000263

 

Antibody HPA011135

 

Antibody HPA011227

 

Antibody CAB010898

 

Antibody CAB047338

 

Fibroblasts

Not detected   Not detected   Low   Low   Not available  

Keratinocytes

Not detected   Low   Medium   Low   Medium  

Langerhans

Not detected   Not detected   Medium   Not detected   Medium  

Melanocytes

Not detected   Not detected   Medium   Low   Medium  
         
         
         

SKIN 2 - Immunohistochemistry

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Annotated protein
expression

Epidermal cells:Medium
 
 
 
 

Antibody staining

Antibody HPA000263

 

Antibody HPA011135

 

Antibody HPA011227

 

Antibody CAB010898

 

Antibody CAB047338

 

Epidermal cells

Not detected   Medium   Medium   Medium   Medium  
            
            
            
         
         
         

SKIN - HPA RNA-seq

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Average FPKM

61.7

overview Female, age 34
Sample 1
FPKM: 74.3
Cell types%
Keratinocytes: 60
Other cell types: 40
overview Female, age 30
Sample 2
FPKM: 62.4
Cell types%
Keratinocytes: 55
Other cell types: 45
N/A Male, age 57
Sample 3
FPKM: 48.3

SKIN - GTEx RNA-seq

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Average RPKM

49.8

GTEx sample id

RPKM

 

Skin - Not Sun Exposed (Suprapubic)

Skin - Not Sun Exposed (Suprapubic)
RPKM: 46.3
Samples: 250

Max RPKM: 132.5
Min RPKM: 19
Std RPKM: 14.7
Median RPKM: 43.2
GTEX-14E6C-2426-SM-5S2NF 132.5
GTEX-WHSE-0126-SM-3NMBT 117.2
GTEX-U8XE-0226-SM-4E3J3 105.9
GTEX-14C38-0726-SM-5SI6M 86.5
GTEX-14A5H-0826-SM-5QGPJ 85.1
GTEX-11WQK-1026-SM-5EQLX 82.0
GTEX-ZYFD-0626-SM-5E44E 79.3
GTEX-11DZ1-2426-SM-5GZZX 77.8
Show all
 

Skin - Sun Exposed (Lower leg)

Skin - Sun Exposed (Lower leg)
RPKM: 53.3
Samples: 357

Max RPKM: 141.2
Min RPKM: 20.9
Std RPKM: 16.4
Median RPKM: 50.5
GTEX-X4XY-0226-SM-4E3IZ 141.2
GTEX-ZTPG-0326-SM-5O9AX 140.4
GTEX-11WQK-0526-SM-5EQLD 112.9
GTEX-QEG5-0226-SM-2I5GI 109.6
GTEX-12584-0126-SM-5EGKQ 104.0
GTEX-XYKS-2126-SM-4E3IB 99.4
GTEX-11TUW-2726-SM-5EQLC 96.9
GTEX-OOBK-0126-SM-2YUND 95.0
Show all