SH3GLB2

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:19.2 FPKM
GTEx:46.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Medium

Presumed off target binding observed and disregarded.

 

Antibody staining

Antibody HPA021438

 

Antibody HPA024734

 

Endothelial cells

Medium   Not detected  

Glandular cells

Medium   Not detected  

Peripheral nerve/ganglion

Medium   Medium  
   
   

COLON - HPA RNA-seq

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Average FPKM

19.2

overview Male, age 54
Sample 1
FPKM: 22.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 21.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 25.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 18.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 22.5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 13.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 10.0
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

46.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 40.9
Samples: 149

Max RPKM: 72.3
Min RPKM: 20.6
Std RPKM: 8.1
Median RPKM: 40.5
GTEX-ZC5H-2426-SM-4WAZ6 72.3
GTEX-X15G-1526-SM-4PQZM 64.7
GTEX-YECK-2826-SM-5IFHF 57.5
GTEX-XUW1-1826-SM-4BOQD 56.4
GTEX-145LS-2926-SM-5O99G 56.3
GTEX-11EMC-1426-SM-5N9E4 55.3
GTEX-11ONC-1926-SM-5GU75 54.4
GTEX-V955-1726-SM-4JBHF 53.9
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 51.0
Samples: 196

Max RPKM: 82.8
Min RPKM: 16.9
Std RPKM: 11.6
Median RPKM: 51.6
GTEX-14E6E-1526-SM-5RQIG 82.8
GTEX-UJMC-1326-SM-4IHLS 76.4
GTEX-UJHI-1126-SM-4IHLN 74.1
GTEX-1399S-1926-SM-5J2M5 74.1
GTEX-SNOS-1226-SM-4DM5H 72.3
GTEX-R55D-1826-SM-48FEF 72.3
GTEX-XPVG-1826-SM-4B64X 70.1
GTEX-XYKS-2226-SM-4E3IU 69.7
Show all