MTA2

COLON - Expression summary

? »

Protein expression

h
m
l
n

RNA expression

HPA:29.9 FPKM
GTEx:23.1 RPKM

COLON - Immunohistochemistry

? »

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA006214

 

Antibody CAB005315

 

Antibody CAB017522

 

Endothelial cells

High   High   High  

Glandular cells

High   High   High  

Peripheral nerve/ganglion

High   High   High  
     
     
     

COLON - HPA RNA-seq

? »

Average FPKM

29.9

overview Male, age 54
Sample 1
FPKM: 23.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 25.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 30.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 20.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 30.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 37.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 41.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

? »

Average RPKM

23.1

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 20.3
Samples: 149

Max RPKM: 36.6
Min RPKM: 12.7
Std RPKM: 4.3
Median RPKM: 19.6
GTEX-11WQK-2526-SM-5CVL8 36.6
GTEX-ZAJG-2626-SM-5S2NU 34.6
GTEX-13O1R-2426-SM-5KLZZ 32.9
GTEX-11TUW-2326-SM-5EQMO 29.4
GTEX-132AR-2826-SM-5IJFV 29.2
GTEX-12WSL-1826-SM-5LZW9 29.0
GTEX-139D8-2926-SM-5IJBM 29.0
GTEX-11TT1-0926-SM-5GU5M 28.8
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 25.9
Samples: 196

Max RPKM: 43.2
Min RPKM: 14.3
Std RPKM: 5.4
Median RPKM: 25.3
GTEX-11WQK-2126-SM-5EQME 43.2
GTEX-11TT1-1026-SM-5PNW7 41.1
GTEX-13S86-1626-SM-5Q5C5 40.8
GTEX-R53T-1326-SM-48FCQ 39.8
GTEX-PWOO-1326-SM-48TCJ 38.6
GTEX-144GM-1226-SM-5LU52 37.5
GTEX-146FQ-1926-SM-5NQBY 37.0
GTEX-144GN-1126-SM-5LU33 36.5
Show all