CTAGE5

COLON - Expression summary

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Protein expression

h
m
l
n

RNA expression

HPA:18.1 FPKM
GTEx:1.0 RPKM

COLON - Immunohistochemistry

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Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA000387

 

Antibody HPA000922

 

Endothelial cells

Low   Not detected  

Glandular cells

Medium   Low  

Peripheral nerve/ganglion

Not detected   Not detected  
   
   

COLON - HPA RNA-seq

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Average FPKM

18.1

overview Male, age 54
Sample 1
FPKM: 20.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
FPKM: 20.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
FPKM: 18.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
FPKM: 17.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
FPKM: 16.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
FPKM: 12.8
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
FPKM: 20.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

COLON - GTEx RNA-seq

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Average RPKM

1.0

GTEx sample id

RPKM

 

Colon - Sigmoid

Colon - Sigmoid
RPKM: 0.6
Samples: 149

Max RPKM: 1.5
Min RPKM: 0
Std RPKM: 0.3
Median RPKM: 0.6
GTEX-11ZTT-1626-SM-5EQKR 1.5
GTEX-YEC3-2026-SM-4WWFL 1.4
GTEX-13CF3-1326-SM-5LZXZ 1.4
GTEX-111YS-1826-SM-5GIEP 1.3
GTEX-13FH7-1626-SM-5J2O9 1.3
GTEX-ZLFU-1426-SM-4WWEU 1.2
GTEX-12BJ1-2026-SM-5FQUH 1.2
GTEX-WFG8-1726-SM-4LVM6 1.2
Show all
 

Colon - Transverse

Colon - Transverse
RPKM: 1.3
Samples: 196

Max RPKM: 3
Min RPKM: 0.3
Std RPKM: 0.6
Median RPKM: 1.2
GTEX-WHWD-1226-SM-4OOS1 3.0
GTEX-YB5E-1626-SM-5IFIQ 2.9
GTEX-UPIC-1726-SM-4IHKG 2.7
GTEX-132AR-2726-SM-5PNVN 2.7
GTEX-145MN-1726-SM-5SIA6 2.7
GTEX-ZF2S-1926-SM-4WWAN 2.6
GTEX-139YR-2126-SM-5KM11 2.6
GTEX-ZYWO-1626-SM-5E44H 2.5
Show all