SAMSN1

GENERAL INFORMATION

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Gene name

SAMSN1

Gene description

SAM domain, SH3 domain and nuclear localization signals 1

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
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HUMAN PROTEIN ATLAS INFORMATION

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RNA tissue category

HPA:Tissue enhanced (appendix, bone marrow)
GTEx:Tissue enhanced (lung, spleen)

Protein evidence

Evidence at protein level

Protein localization

Cytoplasmic expression in several different tissues, most abundant in Leydig and lymphoid cells.

ANTIBODY RELIABILITY

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Data reliability
description

Pending RNA-based expert annotation.

Data reliability

Uncertain based on 2 antibodies.
HPA010645 , HPA017055
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RNA AND PROTEIN EXPRESSION SUMMARY

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RNA expression (FPKM) Protein expression (score)
Brain
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Lung

Liver

Colon

Kidney

Testis



PROTEIN EXPRESSION OVERVIEW

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Organ

Expression



RNA EXPRESSION OVERVIEW

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HPA dataset
RNA tissue category:  Tissue enhanced (appendix, bone marrow)

Organ

Expression

GTEx dataset
RNA tissue category:  Tissue enhanced (lung, spleen)

Organ

Expression



GENE INFORMATION

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Gene name

SAMSN1 (HGNC Symbol)

Synonyms

HACS1, NASH1, SASH2, SH3D6B, SLy2

Description

SAM domain, SH3 domain and nuclear localization signals 1 (HGNC Symbol)

Entrez gene summary

SAMSN1 is a member of a novel gene family of putative adaptors and scaffold proteins containing SH3 and SAM (sterile alpha motif) domains (Claudio et al., 2001 [PubMed 11536050]).[supplied by OMIM, Mar 2008]

Chromosome

21

Cytoband

q11.2

Chromosome location (bp)

14485228 - 14583402

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000155307 (version 78.38)

Entrez gene

64092

UniProt

Q9NSI8 (UniProt - Evidence at protein level)

neXtProt

NX_Q9NSI8

Antibodypedia

SAMSN1 antibodies


PROTEIN BROWSER

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ENST00000285670
 
ENST00000400564
 
ENST00000400566
 
ENST00000619120
 
 
 
 


PROTEIN INFORMATION

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Splice variant

Ensembl

UniProt

Protein class

Gene ontology

Length
(aa)

Molecular mass
(kDa)

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SAMSN1-001 ENSP00000285670
ENST00000285670
Q9NSI8
Show all »
Show » Show » 441 49.6 No 0
SAMSN1-002 ENSP00000383411
ENST00000400566
Q9NSI8
Show all »
Show » Show » 373 41.7 No 0
SAMSN1-003 ENSP00000383409
ENST00000400564
Q9NSI8
Show all »
Show » Show » 205 23.5 No 0
SAMSN1-201 ENSP00000480850
ENST00000619120
S6FRS6
Show all »
Show » Show » 304 34.2 No 0